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The map label for this gene is tse [H]

Identifier: 16766515

GI number: 16766515

Start: 3380802

End: 3382367

Strand: Reverse

Name: tse [H]

Synonym: STM3216

Alternate gene names: 16766515

Gene position: 3382367-3380802 (Counterclockwise)

Preceding gene: 16766516

Following gene: 16766513

Centisome position: 69.63

GC content: 50.51

Gene sequence:

>1566_bases
ATGTTTTTGCATAACATTAAAATACGTTCAAAATTATTTATGGCCTTTGGCTTATTCATTGTTCTCATGGTGGTGAGTTC
CGCTCTGTCTTTGTTTAGCCTTGATCGGGCTAATACGGGTATGCAGAACATTATTACCAATGATTATCCCACCACGGTGA
AAGCCAATCTGTTAATCGATAATTTTAATGATTTCATCATCGCGCAGCAGCTCATGTTACTGGATGAAGAGGGGCGCTGG
AGCCAGAGTTCGCAGAAAGAGCTGGATGAAATAAGCCAGCGTATTACGGCGTTACTGGATGAGCTTTCCAGCAATCGTCA
CGATGCGGCTTCGCAGAAAATCATTACCGAGATCCGTGAAGCGCGCCAGCAATACCTGGAGTCCAGATTCCGTATTTTGC
AAGATATTCAAAGCCATAATCGTCAGGCGGCCATTCAGGAGATGATGACCAGAACGGTGCAAGTGCAAAAGGTCTATAAG
GACAAAGTTCAGGAACTTATCGCCGTTCAGGATGCGCAGATGCACAACGCGGGCGTGCAGGTCGAAGGAGATTTTAAAAC
TAACCGGACGCTGTTAATTACCCTGGCGCTGATAAGCATCGCTGCCGGATGCGTAATGGGATGGTATATCGTACGTTCCA
TTACCCGACCGCTTGATGAAGCGGTACGCTTTGCCGAGGCGATTGCCGATGGCGATCTGACTCGCCATATCACCACCGAC
TATAAAGATGAAACAGGCGTACTACTGCAAGCATTAATGGCGATGAAAACGCGTCTGCTGGATATCGTACAGGAAGTGCA
AAACGGTTCGGAGAGTATCTCCACGGCGGCGGCGCAAATTGTCGCCGGTAACCAGGATTTGGCCGCGCGTACGGAAGAAC
AGGCCAGCTCGGTTGAAGAAACGGCGGCGTCGATGGAACAGATTACCGCCACGGTTAAAAACACAGCTGACCATACCAGT
GAAGCGACCAAACTCTCTGCCGGCGCCGCCAGCGTAGTGAAAAACAATGGGGAGATGATGAATCAAGTGACGCAGAAAAT
GCGCGTCATTAACGATACGGCAAATCGTATGTCGGATATCATCAATATCATTGATTCCATTGCCTTTCAGACCAATATTC
TGGCGCTGAACGCGGCGGTTGAAGCGGCGCGTGCGGGCGAACATGGACGTGGTTTTGCCGTTGTCGCCGGAGAGGTTCGC
CAGTTGGCGCAAAAGAGCGCCTCGTCAGCCAGTGAAATCCGTAATTTGATTGAAGATTCAACCAGTCAGACTCAGGAAGG
GATGCACCTGGTGGAGAAAGCCAGCGCCCTGATTAATGGCATGGTGGATAACGTCGAAGAGATGGATGTGATATTACGCG
AGATTGGGCAGGCCAGCCGTGAGCAAACTGACGGTATTTCGCAGATTAACAGCGCGATTGGCCTGATTGACGCCGCCACG
CAACAAAACTCCTGCCTTGTGGAAGAGTCTGTTGCCGCCGCGGCGTCGCTGAACGAACAGGCGTTACATTTAAAAGAGCT
GGTTAACGTGTTCCGCGTCCGCGAAGAGGACACGCAGCCCGCTTAA

Upstream 100 bases:

>100_bases
AATAATGTTCCGAAATAAAAAGCGATCAATATCATAAAGTTAGTAACATTATTGCCGATAAATCTTCCTGTATGAGGATA
TGCAATCCCAGGGAGAAAAT

Downstream 100 bases:

>100_bases
TCCAGTTCGGCGATTTCCAGCGCCGCGCGATCAATCACGCCGATAATGCGTTTGATTTGCGCGTCGTTGATATCGCTGTG
GTTTATCCGCAGATCCAGCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLIDNFNDFIIAQQLMLLDEEGRW
SQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIREARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYK
DKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTD
YKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTS
EATKLSAGAASVVKNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVR
QLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAAT
QQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA

Sequences:

>Translated_521_residues
MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLIDNFNDFIIAQQLMLLDEEGRW
SQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIREARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYK
DKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTD
YKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTS
EATKLSAGAASVVKNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVR
QLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAAT
QQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA
>Mature_521_residues
MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLIDNFNDFIIAQQLMLLDEEGRW
SQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIREARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYK
DKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTD
YKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTS
EATKLSAGAASVVKNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVR
QLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAAT
QQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=531, Percent_Identity=34.4632768361582, Blast_Score=251, Evalue=6e-68,
Organism=Escherichia coli, GI1788195, Length=307, Percent_Identity=49.185667752443, Blast_Score=250, Evalue=2e-67,
Organism=Escherichia coli, GI1788194, Length=328, Percent_Identity=43.9024390243902, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI2367378, Length=348, Percent_Identity=44.5402298850575, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1789453, Length=326, Percent_Identity=37.1165644171779, Blast_Score=180, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57254; Mature: 57254

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLID
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEE
NFNDFIIAQQLMLLDEEGRWSQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIRE
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYKDKVQELIAVQDAQMHNAGVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
YKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TAASMEQITATVKNTADHTSEATKLSAGAASVVKNNGEMMNQVTQKMRVINDTANRMSDI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
INIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRQLAQKSASSASEIRNLIEDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHCC
TSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
QQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLID
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEE
NFNDFIIAQQLMLLDEEGRWSQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIRE
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYKDKVQELIAVQDAQMHNAGVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
YKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TAASMEQITATVKNTADHTSEATKLSAGAASVVKNNGEMMNQVTQKMRVINDTANRMSDI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
INIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRQLAQKSASSASEIRNLIEDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHCC
TSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
QQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]