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The map label for this gene is yqjH [H]

Identifier: 16766513

GI number: 16766513

Start: 3379159

End: 3379926

Strand: Reverse

Name: yqjH [H]

Synonym: STM3214

Alternate gene names: 16766513

Gene position: 3379926-3379159 (Counterclockwise)

Preceding gene: 16766515

Following gene: 16766512

Centisome position: 69.58

GC content: 55.86

Gene sequence:

>768_bases
ATGACGACATCATCCGTACGCTACCCACAGCGTGTTCGTAATGAGCTGCGTTTTCGCGAGCTGATCGTTCTGCGGGTAGA
ACGTATTAGCGCAGGATTTCAGCGGATCGTACTTGGCGGCGAGGCGCTGGACGGTTTCATCTCCCTGGGCTTTGACGATC
ACACGAAAGTTTTTTTCCCTGAGCCAGGCTGTCGCTTTACGCCTCCGACAGTCACTGAGGAAGGCATTATCTGGGGGGAG
GGCGTTCGCCCGGTCTCCAGGGATTACACGCCGCTGTATGACGAGGCGCGTCGCGAGCTGGCGCTGGATTTCTTTATCCA
CGATGGCGGCGTAGCCAGCCGTTGGGCAATGGAAGCCCGTGAAGGCGATACACTGACGATCGGCGGGCCGCGCGGTTCGC
TGGTGGTGCCGGAAGAGTATGCCTGTCAGGTTTATGTCTGCGATGAGTCCGGTATGCCTGCGCTACGTCGTCGTCTGGAA
TCGCTTAGCCGTCTGCCTGTGCGCCCTGCGGTAACCGCGCTGGTGAGCATTCAGGATGCGGCATACCGCGATTATCTCGC
CCATTTGACGGATATTACTGTGGAATATGTTGTTGGCGGCGATGAACAGGCAATGCAAACGCGCCTGTCGCAGCTGACAA
TACCAGAATCAGACTATTTCATCTGGATTACTGGCGAAGGCAAAACGGTAAAACGTTTAAGTCAGTGCTTTGAAAAGGGG
TTTGATCCACACCTGGTACGTGCGGCAGCCTATTGGCATCGTAAATAG

Upstream 100 bases:

>100_bases
CAGAACACTATCAAAAAACAGTTGCATTTTTACTGATTAACAATCATTATCATTTAAAACTTTAATTTAGATATATCGTA
TTACTTCACGAAGGCAAAAA

Downstream 100 bases:

>100_bases
CGGTATGGGGTGAGCCCTGTCAGAAACAAAAAGGCCACTCTTTAGAGTGGCTTAATTATATGATTTTAAAGCTAAAATTT
GGTGGCCCCTGCTGGACTTG

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTTSSVRYPQRVRNELRFRELIVLRVERISAGFQRIVLGGEALDGFISLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGE
GVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEEYACQVYVCDESGMPALRRRLE
SLSRLPVRPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKG
FDPHLVRAAAYWHRK

Sequences:

>Translated_255_residues
MTTSSVRYPQRVRNELRFRELIVLRVERISAGFQRIVLGGEALDGFISLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGE
GVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEEYACQVYVCDESGMPALRRRLE
SLSRLPVRPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKG
FDPHLVRAAAYWHRK
>Mature_254_residues
TTSSVRYPQRVRNELRFRELIVLRVERISAGFQRIVLGGEALDGFISLGFDDHTKVFFPEPGCRFTPPTVTEEGIIWGEG
VRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAREGDTLTIGGPRGSLVVPEEYACQVYVCDESGMPALRRRLES
LSRLPVRPAVTALVSIQDAAYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKGF
DPHLVRAAAYWHRK

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=254, Percent_Identity=71.6535433070866, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28878; Mature: 28747

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSVRYPQRVRNELRFRELIVLRVERISAGFQRIVLGGEALDGFISLGFDDHTKVFFP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHCHHEECCCCCCCEEEEC
EPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHCC
EGDTLTIGGPRGSLVVPEEYACQVYVCDESGMPALRRRLESLSRLPVRPAVTALVSIQDA
CCCEEEECCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKG
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCC
FDPHLVRAAAYWHRK
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSSVRYPQRVRNELRFRELIVLRVERISAGFQRIVLGGEALDGFISLGFDDHTKVFFP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHCHHEECCCCCCCEEEEC
EPGCRFTPPTVTEEGIIWGEGVRPVSRDYTPLYDEARRELALDFFIHDGGVASRWAMEAR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHCC
EGDTLTIGGPRGSLVVPEEYACQVYVCDESGMPALRRRLESLSRLPVRPAVTALVSIQDA
CCCEEEECCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AYRDYLAHLTDITVEYVVGGDEQAMQTRLSQLTIPESDYFIWITGEGKTVKRLSQCFEKG
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCC
FDPHLVRAAAYWHRK
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]