| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766425
Identifier: 16766425
GI number: 16766425
Start: 3284877
End: 3285434
Strand: Reverse
Name: 16766425
Synonym: STM3125
Alternate gene names: NA
Gene position: 3285434-3284877 (Counterclockwise)
Preceding gene: 16766426
Following gene: 16766423
Centisome position: 67.64
GC content: 46.42
Gene sequence:
>558_bases ATGTCCTCCGTCCCCTGGTTTAAGAGCACATTAATGAACATGGTGTTACGTGATTTGAGCGGCTGGCGTTGTGAAAAATT GACCGAACATAGCGCCGTGCTGCATCTGAATGCATTTACCCAGGTTATCTGCCATGCTCAGCAAAAACGGTTATTCATGG CCAGTATTCACAGTTGTGAATTCAGGGTGAAAGGCACAATCAATTATCCTTTGCAGGGCAAAATTCGCGTTCATCAGCCC GGATGGCTGAAACGTTATCCCGTCATTTTTACTGGCAGCAAAAGTACCGCCGGGCTGATTAACTATCTTAATTGTTTCCC CAATTTACAACAGGCACTGAGTGAACTGGATTATCGTCGGTTTACGCTGGTTTTACATCATAAGGAATGGTATTGCAGCA TTGAGCTATGGGCTGCTAGCGAAGTAGTTTGTAAAATGCCGCCGCTGCGCCGTTATCTGCGGCTTGAGCGGCACCAGCGT GTTCTTCTGCTTAGTGTGATAAATATGATCAATCAGGCCATGAATCAATGGCTGCAACAGGATACCGACGCCAGATAA
Upstream 100 bases:
>100_bases GTGCAACGGGTTAATCCTTTCCTCCCGCTTCCGGTAGAAGAGGTCGTGGAACGGGCTATGGGCAATTATGAAAAGCGAAA CAATGAAGAGATGACGCCAG
Downstream 100 bases:
>100_bases TATGACATTTTATTGAGGCATCAGATCAGAGAGTGGTATTAATTCAGGCATATATGACAATGGGGAAAAGACCCGCAATT GACGCGGGTTAAAAAGCACG
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSSVPWFKSTLMNMVLRDLSGWRCEKLTEHSAVLHLNAFTQVICHAQQKRLFMASIHSCEFRVKGTINYPLQGKIRVHQP GWLKRYPVIFTGSKSTAGLINYLNCFPNLQQALSELDYRRFTLVLHHKEWYCSIELWAASEVVCKMPPLRRYLRLERHQR VLLLSVINMINQAMNQWLQQDTDAR
Sequences:
>Translated_185_residues MSSVPWFKSTLMNMVLRDLSGWRCEKLTEHSAVLHLNAFTQVICHAQQKRLFMASIHSCEFRVKGTINYPLQGKIRVHQP GWLKRYPVIFTGSKSTAGLINYLNCFPNLQQALSELDYRRFTLVLHHKEWYCSIELWAASEVVCKMPPLRRYLRLERHQR VLLLSVINMINQAMNQWLQQDTDAR >Mature_184_residues SSVPWFKSTLMNMVLRDLSGWRCEKLTEHSAVLHLNAFTQVICHAQQKRLFMASIHSCEFRVKGTINYPLQGKIRVHQPG WLKRYPVIFTGSKSTAGLINYLNCFPNLQQALSELDYRRFTLVLHHKEWYCSIELWAASEVVCKMPPLRRYLRLERHQRV LLLSVINMINQAMNQWLQQDTDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21775; Mature: 21644
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVPWFKSTLMNMVLRDLSGWRCEKLTEHSAVLHLNAFTQVICHAQQKRLFMASIHSCE CCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCE FRVKGTINYPLQGKIRVHQPGWLKRYPVIFTGSKSTAGLINYLNCFPNLQQALSELDYRR EEEEEEECCCCCCEEEECCCCCCEECCEEEECCCCHHHHHHHHHHCHHHHHHHHHCCHHE FTLVLHHKEWYCSIELWAASEVVCKMPPLRRYLRLERHQRVLLLSVINMINQAMNQWLQQ EEEEEECCCEEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DTDAR CCCCC >Mature Secondary Structure SSVPWFKSTLMNMVLRDLSGWRCEKLTEHSAVLHLNAFTQVICHAQQKRLFMASIHSCE CCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCE FRVKGTINYPLQGKIRVHQPGWLKRYPVIFTGSKSTAGLINYLNCFPNLQQALSELDYRR EEEEEEECCCCCCEEEECCCCCCEECCEEEECCCCHHHHHHHHHHCHHHHHHHHHCCHHE FTLVLHHKEWYCSIELWAASEVVCKMPPLRRYLRLERHQRVLLLSVINMINQAMNQWLQQ EEEEEECCCEEEEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DTDAR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA