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The map label for this gene is 16766399

Identifier: 16766399

GI number: 16766399

Start: 3259128

End: 3259814

Strand: Reverse

Name: 16766399

Synonym: STM3098

Alternate gene names: NA

Gene position: 3259814-3259128 (Counterclockwise)

Preceding gene: 16766400

Following gene: 16766390

Centisome position: 67.11

GC content: 57.21

Gene sequence:

>687_bases
ATGTCATCACAACCGAATCAAAGCCTGATAGATGGCATTCGCTGTCTGCAATATCTGGTCTCCAGCGACCGTGCTATCGG
ATGTCGCGAGCTTGCCCGGCTGATGGATATTAATACCACGCGCGTTAATCGCCTGTTAATGACGATGGCCTCTATTGGAC
TCACGATGCAGGATGAGCACCGACGCTATTTACCCGGGCCAGGCATTCATGCTTTGGCGGCGCAGGCGATTCGCGGTTCA
GCGCTGTTCTCCCATGCGTTGCCTATCCTTGAGCGCCATGCGCCCAAAGACATCGTGGTGGCATTAGGCGTGCTATGGGA
AGACCAGATTATCTATATTTATCACTCTACGCCGGGTTCGCAGGGAAGTCAGGCGCTGGCGGGGTTTCGCATGTACCCTG
CCTGGCAGTCGGTACCTGGGGTGGCGTTACTGGCGGCAGAAAGCGATGAGGCGCTAATGCAGCGTTTTACTCCGGAGCAA
TGGCGTAATCTGGCGCCGCATGTGGCGCAGCAGCGCCAGCGGGGATACGTACTGTGGCATCACGCTGATGGTGAAGTTTC
TATGGCGCAACCGCTAGGCAAGCACGCCGCAGCGCTGGCCTTTGCGGGAATGTGGCGGATTGATGAGGCGGAGGCGGCTG
CGCGTTTACAGGCGCTGAAGGCACTAAACCAGCTTATTGCCCAGTAA

Upstream 100 bases:

>100_bases
GTTGACTGGCGCGGTGGATTGAACGGCATGCAGGCTTGTATCCTGGCGAACCGGCGTTAAAATCGCAGCTTTGTTAAAAC
CACAGCGAAGCCATTTAACG

Downstream 100 bases:

>100_bases
GCCTGGCAACCGTGACCGCGTTACCCGCCTGCTGACAAAAACGGCTTTAATACCCCTGTTCAAAATAGCTTTCGAGGATA
ATCACGGCGGAGGCCGAGTC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein IclR

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNRLLMTMASIGLTMQDEHRRYLPGPGIHALAAQAIRGS
ALFSHALPILERHAPKDIVVALGVLWEDQIIYIYHSTPGSQGSQALAGFRMYPAWQSVPGVALLAAESDEALMQRFTPEQ
WRNLAPHVAQQRQRGYVLWHHADGEVSMAQPLGKHAAALAFAGMWRIDEAEAAARLQALKALNQLIAQ

Sequences:

>Translated_228_residues
MSSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNRLLMTMASIGLTMQDEHRRYLPGPGIHALAAQAIRGS
ALFSHALPILERHAPKDIVVALGVLWEDQIIYIYHSTPGSQGSQALAGFRMYPAWQSVPGVALLAAESDEALMQRFTPEQ
WRNLAPHVAQQRQRGYVLWHHADGEVSMAQPLGKHAAALAFAGMWRIDEAEAAARLQALKALNQLIAQ
>Mature_227_residues
SSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNRLLMTMASIGLTMQDEHRRYLPGPGIHALAAQAIRGSA
LFSHALPILERHAPKDIVVALGVLWEDQIIYIYHSTPGSQGSQALAGFRMYPAWQSVPGVALLAAESDEALMQRFTPEQW
RNLAPHVAQQRQRGYVLWHHADGEVSMAQPLGKHAAALAFAGMWRIDEAEAAARLQALKALNQLIAQ

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25179; Mature: 25048

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS51077 HTH_ICLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNRLLMTMASIGLTMQDEH
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
RRYLPGPGIHALAAQAIRGSALFSHALPILERHAPKDIVVALGVLWEDQIIYIYHSTPGS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCEEEEEECCCCC
QGSQALAGFRMYPAWQSVPGVALLAAESDEALMQRFTPEQWRNLAPHVAQQRQRGYVLWH
CCHHHHHHCEECCCHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEE
HADGEVSMAQPLGKHAAALAFAGMWRIDEAEAAARLQALKALNQLIAQ
ECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNRLLMTMASIGLTMQDEH
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
RRYLPGPGIHALAAQAIRGSALFSHALPILERHAPKDIVVALGVLWEDQIIYIYHSTPGS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCEEEEEECCCCC
QGSQALAGFRMYPAWQSVPGVALLAAESDEALMQRFTPEQWRNLAPHVAQQRQRGYVLWH
CCHHHHHHCEECCCHHCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEE
HADGEVSMAQPLGKHAAALAFAGMWRIDEAEAAARLQALKALNQLIAQ
ECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA