Click here to switch to the map view.

The map label for this gene is yqgD [H]

Identifier: 16766390

GI number: 16766390

Start: 3251338

End: 3251637

Strand: Reverse

Name: yqgD [H]

Synonym: STM3089

Alternate gene names: 16766390

Gene position: 3251637-3251338 (Counterclockwise)

Preceding gene: 16766399

Following gene: 16766388

Centisome position: 66.94

GC content: 45.33

Gene sequence:

>300_bases
ATGACAGAAGATTCTACCATGAGTCTGAAGGTTGCTGACACTGGCAGTCTGAGTGTTAATCAGTATGGATGGATTAACAT
CTGGACGGCTATTTTAGGTCACTTCTTCGCCCAATTTCCAGCTTTTTTTGAAGGCCGTCGCAATGTCGGTCAAAATCAGG
CGGTAAACGTTTCTGATAATGCTGACATTATGCGCATTTATGCTTTGCTTTTTTTCTGCGTTCTGGGTATAAAACGCGAC
GCGCGGCTCATACAAAAGCACACGACGTTTTCTTCGTGTCGCCACTTCCAGCCGGGTTAA

Upstream 100 bases:

>100_bases
ATGCCCTTCTGATACGGACTCAGACGTAAAAAGGTGTTTTGCCATATTTAATTTCACCTAAGGAGAATTTAGTTAGCTCA
AACTGTTGTGCGGAATAGTC

Downstream 100 bases:

>100_bases
AACGTTGCTTTGGCTTGTGGGTTCGTCTTACGAGGCGGCCGTGGAGGTGATACGAGATAATGAACCGTTGTATTCTGCTG
AATCTGTCGCATCGTTCTGG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTEDSTMSLKVADTGSLSVNQYGWINIWTAILGHFFAQFPAFFEGRRNVGQNQAVNVSDNADIMRIYALLFFCVLGIKRD
ARLIQKHTTFSSCRHFQPG

Sequences:

>Translated_99_residues
MTEDSTMSLKVADTGSLSVNQYGWINIWTAILGHFFAQFPAFFEGRRNVGQNQAVNVSDNADIMRIYALLFFCVLGIKRD
ARLIQKHTTFSSCRHFQPG
>Mature_98_residues
TEDSTMSLKVADTGSLSVNQYGWINIWTAILGHFFAQFPAFFEGRRNVGQNQAVNVSDNADIMRIYALLFFCVLGIKRDA
RLIQKHTTFSSCRHFQPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020263
- ProDom:   PD060540 [H]

Pfam domain/function: PF10885 DUF2684 [H]

EC number: NA

Molecular weight: Translated: 11219; Mature: 11088

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDSTMSLKVADTGSLSVNQYGWINIWTAILGHFFAQFPAFFEGRRNVGQNQAVNVSDN
CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
ADIMRIYALLFFCVLGIKRDARLIQKHTTFSSCRHFQPG
CHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure 
TEDSTMSLKVADTGSLSVNQYGWINIWTAILGHFFAQFPAFFEGRRNVGQNQAVNVSDN
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
ADIMRIYALLFFCVLGIKRDARLIQKHTTFSSCRHFQPG
CHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]