Click here to switch to the map view.

The map label for this gene is invH [H]

Identifier: 16766206

GI number: 16766206

Start: 3044389

End: 3044832

Strand: Direct

Name: invH [H]

Synonym: STM2900

Alternate gene names: 16766206

Gene position: 3044389-3044832 (Clockwise)

Preceding gene: 16766183

Following gene: 16766207

Centisome position: 62.67

GC content: 42.12

Gene sequence:

>444_bases
ATGAAAAAATTTTATAGCTGTCTTCCTGTCTTTTTACTGATCGGCTGTGCTCAGGTGCCCCTCCCTTCCTCCGTGAGCAA
ACCGGTACAGCAACCTGGCGCTCAGAAAGAGCAACTGGCCAACGCAAATAGTATTGATGAGTGTCAGTCTCTTCCGTATG
TGCCGTCAGACCTTGCGAAGAATAAATCATTATCAAACCATAACGCTGATAATTCCGCATCAAAAAATAGCGCAATCAGC
TCAAGCATTTTTTGCGAAAAATATAAACAAACCAAAGAACAGGCGCTCACCTTCTTCCAGGAACATCCACAATACATGCG
TTCGAAAGAAGATGAAGAGCAACTCATGACCGAATTTAAAAAAGTTTTGCTTGAACCCGGAAGTAAGAATTTAAGCATAT
ATCAGACGTTACTTGCTGCCCATGAAAGACTGCAAGCCTTATAA

Upstream 100 bases:

>100_bases
CATTCCTGAAACGCATTCGCCCCCTTATAACTATTGTCAGATAACGTTCTGACGGTTGTGTAAAAACATGGCGCCTCATT
CTTCTGTAGTTGGAGTTAAT

Downstream 100 bases:

>100_bases
GGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTA
TTATAGCTATGGTCACTTTT

Product: needle complex outer membrane lipoprotein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKKFYSCLPVFLLIGCAQVPLPSSVSKPVQQPGAQKEQLANANSIDECQSLPYVPSDLAKNKSLSNHNADNSASKNSAIS
SSIFCEKYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHERLQAL

Sequences:

>Translated_147_residues
MKKFYSCLPVFLLIGCAQVPLPSSVSKPVQQPGAQKEQLANANSIDECQSLPYVPSDLAKNKSLSNHNADNSASKNSAIS
SSIFCEKYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHERLQAL
>Mature_147_residues
MKKFYSCLPVFLLIGCAQVPLPSSVSKPVQQPGAQKEQLANANSIDECQSLPYVPSDLAKNKSLSNHNADNSASKNSAIS
SSIFCEKYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHERLQAL

Specific function: Probably part of the functional outer membrane translocation complex in type III secretion systems. Required for the proper localization of invG in the outer membrane and for the secretion of the virulence factor sipC. Necessary for efficient adherence an

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006830
- ProDom:   PD004896 [H]

Pfam domain/function: PF04741 InvH [H]

EC number: NA

Molecular weight: Translated: 16455; Mature: 16455

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFYSCLPVFLLIGCAQVPLPSSVSKPVQQPGAQKEQLANANSIDECQSLPYVPSDLAK
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCHHHHH
NKSLSNHNADNSASKNSAISSSIFCEKYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KVLLEPGSKNLSIYQTLLAAHERLQAL
HHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKFYSCLPVFLLIGCAQVPLPSSVSKPVQQPGAQKEQLANANSIDECQSLPYVPSDLAK
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCCCHHHHH
NKSLSNHNADNSASKNSAISSSIFCEKYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KVLLEPGSKNLSIYQTLLAAHERLQAL
HHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8382333 [H]