| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is iagB [H]
Identifier: 16766183
GI number: 16766183
Start: 3021535
End: 3022017
Strand: Direct
Name: iagB [H]
Synonym: STM2877
Alternate gene names: 16766183
Gene position: 3021535-3022017 (Clockwise)
Preceding gene: 16766182
Following gene: 16766206
Centisome position: 62.2
GC content: 41.41
Gene sequence:
>483_bases ATGCATTATTTTTTTATCATCGTAATCTGGTTGCTTAGCATAAATACGGCATGGGCTGATTGCTGGCTTCAGGCTGAAAA AATGTTCAATATTGAATCCGAACTACTTTACGCTATCGCCCAGCAGGAATCGGCGATGAAACCTGGCGCCATTGGTCATA ACCGAGATGGTTCAACCGATCTTGGCCTGATGCAAATTAACAGCTTCCATATGAAAAGGCTGAAAAAAATGGGGATTAGT GAAAAACAGTTGTTACAGGACCCCTGCATTTCTGTCATTGTGGGCGCCTCCATTTTATCAGATATGATGAAAATCTACGG TTATAGCTGGGAGGCCGTTGGCGCTTATAATGCCGGGACGTCGCCGAAACGATCGGATATAAGGAAACGTTATGCTAAAA AAATTTGGGAGAATTACAGAAAATTAAAAGGAATGTCAGCAGAAGAGAAAAACAAAAGACTTTCTATCGCGGCAAACAAA TAA
Upstream 100 bases:
>100_bases AAATGTGGAATAAATTTAAAAACGAAGACAATATTTGGTTCAAAAGATGGAAACAGGATCCCCGCTTGATTAAATTACGG TAAAATCTGAGAGAGGAGAT
Downstream 100 bases:
>100_bases TTATACAGAAATAGCTTACTTTCAGATAGTTCTAAAAGTAAGCTATGTTTTTATCAGCTTGCCGTCGTCATAAGCAACTG GGCTTGCATTGCTTTTAGTT
Product: invasion protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGHNRDGSTDLGLMQINSFHMKRLKKMGIS EKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGTSPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAANK
Sequences:
>Translated_160_residues MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGHNRDGSTDLGLMQINSFHMKRLKKMGIS EKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGTSPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAANK >Mature_160_residues MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGHNRDGSTDLGLMQINSFHMKRLKKMGIS EKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGTSPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAANK
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iagB/ipgF/P19 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: NA
Molecular weight: Translated: 18286; Mature: 18286
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGHNRDGSTD CHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC LGLMQINSFHMKRLKKMGISEKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC SPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAANK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC >Mature Secondary Structure MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGHNRDGSTD CHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC LGLMQINSFHMKRLKKMGISEKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC SPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAANK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7754225; 11677608; 12644504 [H]