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The map label for this gene is ygaY [H]

Identifier: 16766123

GI number: 16766123

Start: 2959440

End: 2960624

Strand: Direct

Name: ygaY [H]

Synonym: STM2812

Alternate gene names: 16766123

Gene position: 2959440-2960624 (Clockwise)

Preceding gene: 16766122

Following gene: 16766124

Centisome position: 60.93

GC content: 58.99

Gene sequence:

>1185_bases
ATGACGAAACCCACTCATGAGCTTAGCCCGGCGCTGATCGTTTTAATGTCTGTGGCCACGGGTCTGGCGGTCGCCAGCAA
CTACTATGCCCAGCCGCTGCTTGATACCATCGCGCATCACTTTTCGCTTTCCGCCAGCTCCGCAGGGTTTATCGTTACCG
CCGCGCAGTTGGGCTATGCCGCTGGCCTGTTGTTTCTGGTGCCGCTCGGCGACATGTTTGAACGCCGAACGCTGATTGTC
TCCATGACGTTGCTGGCGGCTGGCGGAATGCTGATCACCGCCAGCAGTCAGTCGCTTAGCATGATGATACTCGGAACGGC
CTTAACCGGACTGTTCTCCGTGGTGGCGCAGATTCTGGTTCCGCTGGCCGCCACACTTGCGACGCCCGCCACCCGCGGTA
AAGTGGTCGGCACCATTATGAGCGGCCTGTTGCTGGGGATCCTGCTGGCGCGAACGGTCGCCGGACTGCTGGCAAACCTC
GGCGGTTGGCGCACCGTATTTTGGGTAGCGTCGGCGCTGATGGCGCTGATGGCCGTCGCGTTATGGCGCGGACTGCCAAA
GCTCAAATCCGACACCCATCTTAACTACCCGCAACTGTTGGGTTCTGTATTCAGCCTGTTTATTCACGATAAGCTGCTGC
GTACCCGCGCACTGCTGGGCTGTCTGACCTTTGCTAATTTCAGCATCCTCTGGACATCAATGGCCTTTTTGCTCGCCGCG
CCGCCGTTTAGCTACTCCGAGGGGATGATTGGCCTGTTTGGCCTGGCGGGGGCCGCCGGCGCTTTAGGCGCGCGTCCGGC
TGGCGGATTTGCCGATAAAGGTAAATCTCACCTCACCACCACGTTCGGCTTACTGCTGCTGTTACTCTCCTGGCTGGCTA
TCTGGCTTGGGCACACCTCGGTACTGGCGCTGATTATTGGCATTCTGGTACTGGACCTCACCGTTCAGGGGGTACATATC
ACCAATCAGACGGTCATCTATCGTTTGCATCCGGATGCGCGTAACCGGCTCACCGCCGGCTATATGACCAGCTACTTTAT
CGGTGGCGCCGCGGGGTCGCTGATTTCCGCCTCCGCCTGGCAACATGCCGGCTGGGCCGGCGTTTGTCTGGCGGGTGTCA
CGGTAGCCTTACTTAATTTACTGGTCTGGTGGCGAGGTTTTCACCGACAGGAAGCCGTAAATTAA

Upstream 100 bases:

>100_bases
TCAAAGCGCACGATTCATCACGTCACCGTTCCCCTTTATTCATCAACATCCGCTATGATTGTTTTCCCAGGAAATAATTA
TCTGAATCACGATTACCATA

Downstream 100 bases:

>100_bases
GCGGATAGTGAGCGTTTACCTTTGTTTAAGCTCCTTAGGGTGTTAAGGAGCTCCCCAGTCTGTTAAGGTTATGCTATTCA
TTTATCATGGTTATTTTTAT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTKPTHELSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRTLIV
SMTLLAAGGMLITASSQSLSMMILGTALTGLFSVVAQILVPLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANL
GGWRTVFWVASALMALMAVALWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRALLGCLTFANFSILWTSMAFLLAA
PPFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKSHLTTTFGLLLLLLSWLAIWLGHTSVLALIIGILVLDLTVQGVHI
TNQTVIYRLHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWAGVCLAGVTVALLNLLVWWRGFHRQEAVN

Sequences:

>Translated_394_residues
MTKPTHELSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRTLIV
SMTLLAAGGMLITASSQSLSMMILGTALTGLFSVVAQILVPLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANL
GGWRTVFWVASALMALMAVALWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRALLGCLTFANFSILWTSMAFLLAA
PPFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKSHLTTTFGLLLLLLSWLAIWLGHTSVLALIIGILVLDLTVQGVHI
TNQTVIYRLHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWAGVCLAGVTVALLNLLVWWRGFHRQEAVN
>Mature_393_residues
TKPTHELSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRTLIVS
MTLLAAGGMLITASSQSLSMMILGTALTGLFSVVAQILVPLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANLG
GWRTVFWVASALMALMAVALWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRALLGCLTFANFSILWTSMAFLLAAP
PFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKSHLTTTFGLLLLLLSWLAIWLGHTSVLALIIGILVLDLTVQGVHIT
NQTVIYRLHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHAGWAGVCLAGVTVALLNLLVWWRGFHRQEAVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=357, Percent_Identity=26.0504201680672, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41526; Mature: 41395

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPTHELSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLSASSAGFIVTAAQLGYA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHH
AGLLFLVPLGDMFERRTLIVSMTLLAAGGMLITASSQSLSMMILGTALTGLFSVVAQILV
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
PLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASALMALMAVA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRALLGCLTFANFSILWTSMAFLLAA
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PPFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKSHLTTTFGLLLLLLSWLAIWLGHTS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLALIIGILVLDLTVQGVHITNQTVIYRLHPDARNRLTAGYMTSYFIGGAAGSLISASAW
HHHHHHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QHAGWAGVCLAGVTVALLNLLVWWRGFHRQEAVN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKPTHELSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLSASSAGFIVTAAQLGYA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHH
AGLLFLVPLGDMFERRTLIVSMTLLAAGGMLITASSQSLSMMILGTALTGLFSVVAQILV
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
PLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASALMALMAVA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LWRGLPKLKSDTHLNYPQLLGSVFSLFIHDKLLRTRALLGCLTFANFSILWTSMAFLLAA
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PPFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKSHLTTTFGLLLLLLSWLAIWLGHTS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLALIIGILVLDLTVQGVHITNQTVIYRLHPDARNRLTAGYMTSYFIGGAAGSLISASAW
HHHHHHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QHAGWAGVCLAGVTVALLNLLVWWRGFHRQEAVN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]