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The map label for this gene is hin [H]

Identifier: 16766084

GI number: 16766084

Start: 2914842

End: 2915414

Strand: Direct

Name: hin [H]

Synonym: STM2772

Alternate gene names: 16766084

Gene position: 2914842-2915414 (Clockwise)

Preceding gene: 16766081

Following gene: 16766085

Centisome position: 60.01

GC content: 46.25

Gene sequence:

>573_bases
ATGGCTACTATTGGGTATATTCGGGTGTCAACAATTGACCAAAATATCGATTTACAGCGTAATGCGCTTACTAGTGCAAA
TTGTGACCGCATTTTTGAGGACCGTATCAGTGGCAAGATTGCAAACCGCCCCGGCCTGAAACGAGCGTTAAAGTATGTAA
ATAAAGGCGATACTCTTGTCGTCTGGAAATTAGACAGACTGGGCCGCAGCGTGAAAAACCTGGTGGCGTTAATATCAGAA
TTACATGAACGTGGAGCTCACTTCCATTCTTTAACCGATAGTATTGATACCAGTAGCGCGATGGGGCGATTCTTTTTTCA
TGTAATGTCAGCACTGGCCGAGATGGAGCGAGAATTAATTGTCGAGCGAACCCTTGCCGGACTGGCTGCCGCCAGAGCGC
AAGGACGACTGGGAGGGCGCCCTCGGGCGATCAACAAACATGAACAGGAACAGATTAGTCGGCTATTAGAGAAAGGCCAT
CCTCGGCAGCAACTAGCTATTATTTTTGGTATTGGCGTATCTACCTTATACAGATATTTTCCGGCAAGCCGCATAAAAAA
ACGAATGAATTAA

Upstream 100 bases:

>100_bases
TTGTGCCATAAAATTTTCCTTTTGGAAGGTTTTTGATAAAGCAATCCTCCATGAGAAAAGCGACTAAAATTCTTCCTTAT
CTGATGTAAAGGAGAAAATC

Downstream 100 bases:

>100_bases
AATAAAAATTACAACAGGATGGATATAACATTTTTGTAATACAGGCGTGTGGCATAAATAAACCGAAAGGGTATACAAAA
AAGACAGCATCTAATTAAAA

Product: DNA-invertase Hin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKNLVALISE
LHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGH
PRQQLAIIFGIGVSTLYRYFPASRIKKRMN

Sequences:

>Translated_190_residues
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKNLVALISE
LHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGH
PRQQLAIIFGIGVSTLYRYFPASRIKKRMN
>Mature_189_residues
ATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLVVWKLDRLGRSVKNLVALISEL
HERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGHP
RQQLAIIFGIGVSTLYRYFPASRIKKRMN

Specific function: A DNA fragment of approximately 900 base pairs, adjacent to the fljB (H2) gene, which specifies the synthesis of phase-2 flagellin, can exist in either orientation with respect to fljB. The orientation of the inversion region controls expression of fljB.

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=179, Percent_Identity=66.4804469273743, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1787638, Length=187, Percent_Identity=37.4331550802139, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1787827, Length=187, Percent_Identity=36.8983957219251, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 21426; Mature: 21295

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLV
CCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE
VWKLDRLGRSVKNLVALISELHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELI
EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
PASRIKKRMN
CHHHHHHHCC
>Mature Secondary Structure 
ATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRALKYVNKGDTLV
CCEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE
VWKLDRLGRSVKNLVALISELHERGAHFHSLTDSIDTSSAMGRFFFHVMSALAEMERELI
EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VERTLAGLAAARAQGRLGGRPRAINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
PASRIKKRMN
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8423149 [H]