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The map label for this gene is insF1 [H]

Identifier: 16766081

GI number: 16766081

Start: 2910977

End: 2911843

Strand: Direct

Name: insF1 [H]

Synonym: STM2769

Alternate gene names: 16766081

Gene position: 2910977-2911843 (Clockwise)

Preceding gene: 16766080

Following gene: 16766084

Centisome position: 59.93

GC content: 53.98

Gene sequence:

>867_bases
ATGAAGTATGTCTTCATCGAAAAACATCAGGCTGAGTTCAATATCAAAGCCATGTGCCGTGTATTTCAGGTTGCCCGTAG
CGGCTGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCGCCTTGTCTGTGATAACGTCGTCC
GGGAAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTC
AACGTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTA
CCGCAAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGG
GTGACATCACGTATCTTCGCACTGGTGAAGGCTGGCTTTATCTGGCCGTGGTTATCGATCTGTGGCCGCGGTCAGTCATT
GGCTGGTCGATGTCCTCGCGGATGACAGCACAGCTTGCCTGCAATGCGTTACAGATGGCGCTGTGGCAGCGTAAATGTCC
GGAAAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTACCAGAGCTTACTGAAACGCCATAATC
TGCGGGGAAGTATGAGCGCCAGAGGTTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAGGGTGGAA
TGTATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATTATAGTGAGTGTGATTACAATCG
GTGGCGTCGTCACAGTGCCTGTGGCGGTCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG

Upstream 100 bases:

>100_bases
TGTCCGCTGAGATCGCCCGTCTGAAACGTCAACTGGCAGAACGGGATGAGGAACTGGCCATTCTCCAGAAGGCCGCGACA
TACTTCGCGAAGCGCCTGAA

Downstream 100 bases:

>100_bases
GGTTGTGCCCATATTACGCGGGTAGGATCAAGCTTCCTTCAGTCTTTTGGGGATCATACCGTGCACCTTATAGGGATTTC
ACGGTAATATTTAGTAATGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYQF
NVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWPRSVI
GWSMSSRMTAQLACNALQMALWQRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVE
CIHGEDFVSREIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA

Sequences:

>Translated_288_residues
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYQF
NVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWPRSVI
GWSMSSRMTAQLACNALQMALWQRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVE
CIHGEDFVSREIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA
>Mature_288_residues
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYQF
NVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWPRSVI
GWSMSSRMTAQLACNALQMALWQRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVE
CIHGEDFVSREIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=243, Percent_Identity=32.5102880658436, Blast_Score=147, Evalue=8e-36,
Organism=Escherichia coli, GI1788405, Length=288, Percent_Identity=84.0277777777778, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1787263, Length=288, Percent_Identity=84.0277777777778, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1786753, Length=288, Percent_Identity=84.0277777777778, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1786570, Length=288, Percent_Identity=84.0277777777778, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1786490, Length=288, Percent_Identity=84.0277777777778, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1789981, Length=274, Percent_Identity=33.2116788321168, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33685; Mature: 33685

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCDNVVREAFSDA
CCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLK
HHHCCCCCCCHHHHHCCCEEHHHHHHHHHHHHCHHHHHHCCCCCCCHHHCCCCHHHHHHH
QDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWPRSVIGWSMSSRMTAQLACNALQMA
HHHHCCCCCCCEEECEEEEEECCCCEEEHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHH
LWQRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVE
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEE
CIHGEDFVSREIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA
EECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCDNVVREAFSDA
CCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLK
HHHCCCCCCCHHHHHCCCEEHHHHHHHHHHHHCHHHHHHCCCCCCCHHHCCCCHHHHHHH
QDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWPRSVIGWSMSSRMTAQLACNALQMA
HHHHCCCCCCCEEECEEEEEECCCCEEEHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHH
LWQRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVE
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEE
CIHGEDFVSREIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA
EECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]