| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766050
Identifier: 16766050
GI number: 16766050
Start: 2876179
End: 2876811
Strand: Direct
Name: 16766050
Synonym: STM2738
Alternate gene names: NA
Gene position: 2876179-2876811 (Clockwise)
Preceding gene: 16766046
Following gene: 16766051
Centisome position: 59.21
GC content: 42.97
Gene sequence:
>633_bases ATGAGTTTAATCAAGGCGGGGAATGATAGTGGTGGGCGCGATGCGATTAACAGGCTTATTAAGGCTTACAATTTCAGCTC ACGACAGCAGCTCTGCGAACATCTGGAAGTATCAAAAAGCACTATGGCTAACAGATACTTAAGGGATAGTTTCCCTGCTG AATGGGTAATTCAATGCGCTCTTGAAACAGGAATTTCCCTTCTATGGCTGGCTACGGGACAAGGAGATATGTATGCGTGT GAGAACGAAGAAAGAAATCTCAAAAACGAAACCTCCGTCACGGTAAGACCACTTTCTAAAATTGTTGCTCCTAGCATCAA ACATGTTGAACTGAAGAACGGTGAACTGCAGCCAAGTGATGAAATTCTTCTTGATAGCAGACTGCTCGATGGTGACTCAT CCAACTCTTTATTTGTAAAAACAGCTACTGATAGCTTTGTTGTGGATACGTCTGTTAAACAAGTCAGTAATGGCTTCTGG TTAGTCGATATGGACGGAGTTAAAAGCATCGTCAAAATCGCTCGCGTTCCAGGCAACAAAATTGTAGTTCACCAAGATGA AACATCATTTGAATGCTCGGTCGACGACATTGAAGCTATCGGGCGTGCAGTCAAAGTAATCAAGAGCCTCTAA
Upstream 100 bases:
>100_bases GTTTGGGTTCGTTTTATCTTGTTTTATGTGGTTTGGTTTTGCTTTTCAAACCATGAATGGATATTAAGATCACTTTTTAT ATACGTCAAGAGGTTTGATT
Downstream 100 bases:
>100_bases CTTATGAGCATCAGAAAACAGCCTAACGGAAAATGGTTGTGTGAATGCTACCCGAACGGACGGGATGGCAAACGTGTACG CAAGCAATTTGCGACTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYAC ENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFW LVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
Sequences:
>Translated_210_residues MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYAC ENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFW LVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL >Mature_209_residues SLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACE NEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWL VDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010744 [H]
Pfam domain/function: PF07022 Phage_CI_repr [H]
EC number: NA
Molecular weight: Translated: 23178; Mature: 23046
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCA CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSD HHCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEEEECCCCCCCCC EILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNK HHEEHHEEECCCCCCEEEEEECCCCEEEECHHHHHCCCEEEEEHHHHHHHHHHHHCCCCE IVVHQDETSFECSVDDIEAIGRAVKVIKSL EEEEECCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCA CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSD HHCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEEEECCCCCCCCC EILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNK HHEEHHEEECCCCCCEEEEEECCCCEEEECHHHHHCCCEEEEEHHHHHHHHHHHHCCCCE IVVHQDETSFECSVDDIEAIGRAVKVIKSL EEEEECCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1701261 [H]