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The map label for this gene is yfiR [H]

Identifier: 16765986

GI number: 16765986

Start: 2812985

End: 2813503

Strand: Direct

Name: yfiR [H]

Synonym: STM2671

Alternate gene names: 16765986

Gene position: 2812985-2813503 (Clockwise)

Preceding gene: 16765982

Following gene: 16765987

Centisome position: 57.91

GC content: 46.24

Gene sequence:

>519_bases
ATGCGTTTTTCTCACCGATTTATCCTTCTGTTATCGCTATTATTAGCAAGCTTGCCTCTGTATGCTCAACGCGTCACGGA
AGAAGAGAAATCCGTACGCGCCATCGTCTCCGGTATCGTCAGTTATACACACTGGCCGGCGTTATCCGGGCCGCCAAGGC
TATGCATATTTTCATCTGCGCGTTTTGTCAGGGTACTTAGCGAAGAGGCTGACTGGGCTTTCCCTTATCAACCGCTTGTC
ATCCGTACCACACAAGAAGCCCTGAGCGCCCGCTGTGATGGTTTTTACTTTGGCAATGAATCGCCAGCTTATCAGGTGGA
GTTAACGCGTCATTATCCAGTTAATGCCTTGTTATTAATTGCCGAGCAAAATACCGAATGTATTATTGGCAGCGCATTTT
GTCTGATCATTAACAATGATGAAGTCAAATTTTCCGTCAACCTGGACTCCCTCTCGCATAGCGGCGTGAGAGTAAATCCA
GAAGTATTAATGCTTGCACGGAATCAAAAGCATGAATAA

Upstream 100 bases:

>100_bases
ATAAGACATAATGACGATATGGCAAAATAATGTTATTTTGCTACAAACAATCACGGATGTATTTTAATGCTTTACGACTG
AAGATGGTGGGGACTTGTTA

Downstream 100 bases:

>100_bases
GGAATTTTCTCTGTCCAGGCCAACATTTAAACGCACACTACGGCGGATTAGTATAATCAGCGTGCTGCTTACAATGACAT
TGATCTGGCTATTAATTTGC

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRFSHRFILLLSLLLASLPLYAQRVTEEEKSVRAIVSGIVSYTHWPALSGPPRLCIFSSARFVRVLSEEADWAFPYQPLV
IRTTQEALSARCDGFYFGNESPAYQVELTRHYPVNALLLIAEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNP
EVLMLARNQKHE

Sequences:

>Translated_172_residues
MRFSHRFILLLSLLLASLPLYAQRVTEEEKSVRAIVSGIVSYTHWPALSGPPRLCIFSSARFVRVLSEEADWAFPYQPLV
IRTTQEALSARCDGFYFGNESPAYQVELTRHYPVNALLLIAEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNP
EVLMLARNQKHE
>Mature_172_residues
MRFSHRFILLLSLLLASLPLYAQRVTEEEKSVRAIVSGIVSYTHWPALSGPPRLCIFSSARFVRVLSEEADWAFPYQPLV
IRTTQEALSARCDGFYFGNESPAYQVELTRHYPVNALLLIAEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNP
EVLMLARNQKHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788955, Length=170, Percent_Identity=65.8823529411765, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19442; Mature: 19442

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSHRFILLLSLLLASLPLYAQRVTEEEKSVRAIVSGIVSYTHWPALSGPPRLCIFSSA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
RFVRVLSEEADWAFPYQPLVIRTTQEALSARCDGFYFGNESPAYQVELTRHYPVNALLLI
HHEEEHHCCCCCCCCCCCEEEEECHHHHHHCCCEEEECCCCCEEEEEEEEECCCEEEEEE
AEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNPEVLMLARNQKHE
EECCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEECCEEEEEECCCCCC
>Mature Secondary Structure
MRFSHRFILLLSLLLASLPLYAQRVTEEEKSVRAIVSGIVSYTHWPALSGPPRLCIFSSA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
RFVRVLSEEADWAFPYQPLVIRTTQEALSARCDGFYFGNESPAYQVELTRHYPVNALLLI
HHEEEHHCCCCCCCCCCCEEEEECHHHHHHCCCEEEECCCCCEEEEEEEEECCCEEEEEE
AEQNTECIIGSAFCLIINNDEVKFSVNLDSLSHSGVRVNPEVLMLARNQKHE
EECCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCEEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]