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The map label for this gene is ypfL

Identifier: 16765773

GI number: 16765773

Start: 2562583

End: 2563860

Strand: Direct

Name: ypfL

Synonym: STM2453

Alternate gene names: 16765773

Gene position: 2562583-2563860 (Clockwise)

Preceding gene: 16765772

Following gene: 16765793

Centisome position: 52.76

GC content: 52.97

Gene sequence:

>1278_bases
ATGGACGAGCGTATTCCTTGTAAAAACCCGCAATGCTCACACTTCATCCTGCCAGCAACGGCTGCCCGCACGGAGGGCTA
TTGTATGCCCTGCGTCCAGGCGCGCTATCGGCAAGTGCAGGAAGAATATATCCGGAAAAACAGAAAAACGATCGACGCGT
TCAGTGGCATTACCAACCCTGTTGAAATGCTTAAACTCGTTCATGAACCCCGGGAACACGATCCGTTAATCGAGTGGATT
CCCTGCCCCATTCCGACCGATGAGCTTTACAAAAAGCTCTCCGATGATGAAAGCCGCGACATGGTCGATTATGCAGAAGA
ATTATTTGATTCCGGATGGCAGGAGGAAGCTCAGGAAATTGCGCTGTGCCTGGCGGCATTTACCCAGGCCAATCTGGATA
ATTTCCTGCGCCAGGTAATAAATGAAGAAGAACTGGAGCTCTCTTCACCCCTACCTTTTCACCGTGCGCCGCCTGACGTA
CGCGACGCGCTTTTGCAGAAGGTGGAAACCGATGACGAAAACCGTGACGGCATTCTTTGTGCCCTGGCCTGGATTGGCGA
TGAGGTTGTCGTTGAGCATTTTAACCGCTGGCGCCAGGAACCACCTGCGTGGAGTGCTTCACTTCATATCCTCCCTCATC
GCTATGCTCACCAGGCGGGATGGGAGCTCACTGAAAATGGCCGCAGGCGCGATCTTTACTTTACGCAATGTACCCATCTG
GTAAAACAGGCACCTGAACAGCCGGCCGTTTTTCGCGCCGTTGCAGAATATGGTGAAAACTGCCCACACTGTTCCCTGCC
GCTAATCAATCTGTTTGAGGTTGCGCCGAGCGCCGTCGGCCTAAGCACGCAGGGTTGGCCCGGTCAAATTCGTATTCTGA
CCTGTCAGTGTTGTACGGCATATAACACCGTTTTCGCCACCGTCGATCCACAAGGCCAGCCGCGATGGTACGAAAAAAAT
GCGCTCTCGACGCTGGCGGTGGAGAATTCCGCTGACTGGATAACGCTACCGCTTGATGTTCTGCACCCCGGGGAATCCCG
TTTGCCGCTATTCGCTGCTGAAATATTTTTACCCACCACCTTCTCACAGCTCGGCGGCCATCCCGCATGGGTTCAGGATA
CAGACTATCCTACGTGCCCAACGTGCGCGCAAACGATGATGTTTCTTGCGCAGCTAAGCTATGAAGATATCGAGGAAGAG
GAATATGCGGAAGGAATGCTTTACGGGTTTATCTGCCCCTCCTGCCAAACAACGGCAACGTCTTATCAGCAAACATAA

Upstream 100 bases:

>100_bases
GTTCATTGTAGATAAAGAATTCGGATAACCGCCCGCTGCCGTTATCATTAGTAAAACAGTACAGTAAGCACTCGTAGAAT
TTGCAGTGGAGCACTACCGC

Downstream 100 bases:

>100_bases
ACGCTCATCCTCATGATCTGATGACAAAACTGTTTTGCACGTTGTGCGCGCGCTTCCCCGGAGGCGGCGCTGGCGCGCCT
TGTCCGGGCTACCAACCACA

Product: cytoplasmic protein

Products: NA

Alternate protein names: ORF79

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQVQEEYIRKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWI
PCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKN
ALSTLAVENSADWITLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEE
EYAEGMLYGFICPSCQTTATSYQQT

Sequences:

>Translated_425_residues
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQVQEEYIRKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWI
PCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKN
ALSTLAVENSADWITLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEE
EYAEGMLYGFICPSCQTTATSYQQT
>Mature_425_residues
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQVQEEYIRKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWI
PCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKN
ALSTLAVENSADWITLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEE
EYAEGMLYGFICPSCQTTATSYQQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPFL_SALTY (Q9ZFU6)

Other databases:

- EMBL:   AF093749
- EMBL:   AE006468
- RefSeq:   NP_461388.1
- PRIDE:   Q9ZFU6
- GeneID:   1253975
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2453
- NMPDR:   fig|99287.1.peg.2369
- HOGENOM:   HBG467877
- OMA:   FSQLGGH
- ProtClustDB:   CLSK894315
- BioCyc:   STYP99287:STM2453-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48391; Mature: 48391

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQVQEEYIRKNRKTIDAFSGITNP
CCCCCCCCCCCCCEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH
VEMLKLVHEPREHDPLIEWIPCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEI
HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
ALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDVRDALLQKVETDDENRDGILC
HHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
ALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
EHHHHCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTA
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCEEEEEEEEEHHH
YNTVFATVDPQGQPRWYEKNALSTLAVENSADWITLPLDVLHPGESRLPLFAAEIFLPTT
CCEEEEEECCCCCCCCCHHCCHHEEEECCCCCEEEEEHHHCCCCCCCCCCEEHHHHHCCC
FSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEEEYAEGMLYGFICPSCQTTAT
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCC
SYQQT
CCCCC
>Mature Secondary Structure
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQVQEEYIRKNRKTIDAFSGITNP
CCCCCCCCCCCCCEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH
VEMLKLVHEPREHDPLIEWIPCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEI
HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
ALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDVRDALLQKVETDDENRDGILC
HHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
ALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
EHHHHCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTA
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCEEEEEEEEEHHH
YNTVFATVDPQGQPRWYEKNALSTLAVENSADWITLPLDVLHPGESRLPLFAAEIFLPTT
CCEEEEEECCCCCCCCCHHCCHHEEEECCCCCEEEEEHHHCCCCCCCCCCEEHHHHHCCC
FSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEEEYAEGMLYGFICPSCQTTAT
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCC
SYQQT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10464203; 11677609