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The map label for this gene is ypfK

Identifier: 16765772

GI number: 16765772

Start: 2562125

End: 2562454

Strand: Direct

Name: ypfK

Synonym: STM2452

Alternate gene names: 16765772

Gene position: 2562125-2562454 (Clockwise)

Preceding gene: 16765771

Following gene: 16765773

Centisome position: 52.75

GC content: 43.33

Gene sequence:

>330_bases
ATGCAAACAAATACACGGAAAGTAGTAACCAGTGACGCCAAATGGCATCCCCATCTGGGTATAAGTTTTATTGGCTGCCT
GCTTGCCATTACACTAGAAATATATTTTGAAGAAAGAATATTCATCCCTCATAGCGGAGGGGTGAGCTTCGGTCTGATCG
TGCTTCTGGTTATCAATATGGTGACCATCCCTGTGGTCATGGCCCTGATAGCATTACTCTGCTTTATTATTCATATTCCG
CGTAAAAGCGTTAACTGTATCTTGCTATGCCTACTGTCATGTATTTTGACGATAGCCGGTTTGTTTATCGCCTATCCGGT
TGGCCGTTGA

Upstream 100 bases:

>100_bases
GGGAGTACGACTGGCAGCCAGAAGCGGGTAGCCCGGAAGCGGCGCTGAGCGAGTTTATTCAGGTACGCGACTGGATTTAA
CTTATTTATAAAGTAAAACA

Downstream 100 bases:

>100_bases
ATAAAAGCAGGCTCGTAGAAATAAACGAGTTCATTGTAGATAAAGAATTCGGATAACCGCCCGCTGCCGTTATCATTAGT
AAAACAGTACAGTAAGCACT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPHSGGVSFGLIVLLVINMVTIPVVMALIALLCFIIHIP
RKSVNCILLCLLSCILTIAGLFIAYPVGR

Sequences:

>Translated_109_residues
MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPHSGGVSFGLIVLLVINMVTIPVVMALIALLCFIIHIP
RKSVNCILLCLLSCILTIAGLFIAYPVGR
>Mature_109_residues
MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPHSGGVSFGLIVLLVINMVTIPVVMALIALLCFIIHIP
RKSVNCILLCLLSCILTIAGLFIAYPVGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPFK_SALTY (Q9ZFU5)

Other databases:

- EMBL:   L19503
- EMBL:   AE006468
- EMBL:   AF093749
- PIR:   C53302
- RefSeq:   NP_461387.1
- GeneID:   1253974
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2452
- NMPDR:   fig|99287.1.peg.2368
- HOGENOM:   HBG467878
- OMA:   LAFAMEV
- ProtClustDB:   CLSK894314
- BioCyc:   STYP99287:STM2452-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12020; Mature: 12020

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf792200)-; HASH(0x105fba64)-; HASH(0x10531798)-;

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPHSGGVSFGLIVLLVINM
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHH
VTIPVVMALIALLCFIIHIPRKSVNCILLCLLSCILTIAGLFIAYPVGR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MQTNTRKVVTSDAKWHPHLGISFIGCLLAITLEIYFEERIFIPHSGGVSFGLIVLLVINM
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHH
VTIPVVMALIALLCFIIHIPRKSVNCILLCLLSCILTIAGLFIAYPVGR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8349542; 11677609; 10464203