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The map label for this gene is stcD [H]

Identifier: 16765478

GI number: 16765478

Start: 2242832

End: 2243839

Strand: Reverse

Name: stcD [H]

Synonym: STM2149

Alternate gene names: 16765478

Gene position: 2243839-2242832 (Counterclockwise)

Preceding gene: 16765479

Following gene: 16765476

Centisome position: 46.19

GC content: 41.27

Gene sequence:

>1008_bases
ATGAAACTCTTTCTTTTTATCGTGATGTTATTGATTTTACCTGAAACATACGCAGCCTGTACGGGAGAAATTACTTATCA
GGATAATTTAATTATTCGTGAGGATTTTACGATTAACCCTAATCAGTCCGCAACTTATAGCCATAATTTTAACGATACAA
CTTGTTCAGGGACTTATAAGATAACGCGTATGGATCCTTCCGATATCATCGTGGGATTATACAATGATACAGTAAAACTG
AAGTTAAAAATCGCCTGGGCAGATAATAATACTCTCACAATGCCGTTTACAACGGGCTATACGGTAACGGTTGAACCCGC
TTCCTCTGGGGCGAATGTAAATATTTCTGCCGGTAGTGGGAACAGTGTCCTAATCAACGGGGTGGTATCAATAACAAGCG
CTTCTTCTGCAACTCAGTTTACGGCCGGTTTGCGGTTTTTAGGGTGCCTGCTAGCAGGAAGAGGTTGGAATGCCTGTGCC
GCAGATTATAATAGTTATCTTAGAGGTGCAGGGTTATATTCATTTGATCTGTTTGTGTCCTACGATCGCAAGCAGACAAC
CTGCAAACCTGAAGATCTGACGATCACGCTACCGAATATTGCGCTTTCTGAATTATATAACACAGGCAAGGTCAGCAACA
AAAATGCCGCGGATAATATTCGACTCCAGTGTGATAATCTTTTTGGTAATGCTAAACAAACATCGCGTAAAATGACGGTT
TATCTCTCCAGCAGTGATTTAATACCAGATAGCTATTCTGTGTTGCGTGGTGCTGTGAATAATGGCGTCGGATTTATACT
GGAGAGCGGTGGAAAAACGGTGAATATTTCAAATACAGCAGAGCAGGGTAATGCTTCAACGTTATGGAAAGTGGATCAAG
TAGGCACGCCGCTCAACAGTGATATGATAACAATCCCTATTATCGCCAGTTATTATGTTTATGACCGAGACAATATAAAG
CCAGGCGATCTAAAAGCGACTGCGCTGATCTATGTGAAATACGATTAA

Upstream 100 bases:

>100_bases
ACCAGTAGATAAAGAGCAGGGGCTTTCATGTTCAATCACCTTTGGTAAAACGGTTGATGAAAGTAAAGTTTATATTTGTC
GGTAGTGGTGAGGTGGTGAA

Downstream 100 bases:

>100_bases
TATATATGAAAAACATTTAAGATATATGGCGCGATAGGTGAATGAACTTCCGGTCACTTACAATAATAAGTGACCGGGAT
GACAATCTTTCTGCAATAAA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSATYSHNFNDTTCSGTYKITRMDPSDIIVGLYNDTVKL
KLKIAWADNNTLTMPFTTGYTVTVEPASSGANVNISAGSGNSVLINGVVSITSASSATQFTAGLRFLGCLLAGRGWNACA
ADYNSYLRGAGLYSFDLFVSYDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAADNIRLQCDNLFGNAKQTSRKMTV
YLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNISNTAEQGNASTLWKVDQVGTPLNSDMITIPIIASYYVYDRDNIK
PGDLKATALIYVKYD

Sequences:

>Translated_335_residues
MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSATYSHNFNDTTCSGTYKITRMDPSDIIVGLYNDTVKL
KLKIAWADNNTLTMPFTTGYTVTVEPASSGANVNISAGSGNSVLINGVVSITSASSATQFTAGLRFLGCLLAGRGWNACA
ADYNSYLRGAGLYSFDLFVSYDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAADNIRLQCDNLFGNAKQTSRKMTV
YLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNISNTAEQGNASTLWKVDQVGTPLNSDMITIPIIASYYVYDRDNIK
PGDLKATALIYVKYD
>Mature_335_residues
MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSATYSHNFNDTTCSGTYKITRMDPSDIIVGLYNDTVKL
KLKIAWADNNTLTMPFTTGYTVTVEPASSGANVNISAGSGNSVLINGVVSITSASSATQFTAGLRFLGCLLAGRGWNACA
ADYNSYLRGAGLYSFDLFVSYDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAADNIRLQCDNLFGNAKQTSRKMTV
YLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNISNTAEQGNASTLWKVDQVGTPLNSDMITIPIIASYYVYDRDNIK
PGDLKATALIYVKYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788426, Length=342, Percent_Identity=50.2923976608187, Blast_Score=323, Evalue=7e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR016959 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36438; Mature: 36438

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSATYSHNFNDTTCSGTYK
CHHHHHHHHHHHCCCCHHHEEEEEEECCCEEEEECEEECCCCCCEEECCCCCCCCCCEEE
ITRMDPSDIIVGLYNDTVKLKLKIAWADNNTLTMPFTTGYTVTVEPASSGANVNISAGSG
EEEECCCCEEEEEECCEEEEEEEEEEECCCEEEEEEECCEEEEEEECCCCCEEEEECCCC
NSVLINGVVSITSASSATQFTAGLRFLGCLLAGRGWNACAADYNSYLRGAGLYSFDLFVS
CEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEE
YDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAADNIRLQCDNLFGNAKQTSRKMTV
ECCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEE
YLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNISNTAEQGNASTLWKVDQVGTPLNS
EECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEHHCCCCCCC
DMITIPIIASYYVYDRDNIKPGDLKATALIYVKYD
CEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKLFLFIVMLLILPETYAACTGEITYQDNLIIREDFTINPNQSATYSHNFNDTTCSGTYK
CHHHHHHHHHHHCCCCHHHEEEEEEECCCEEEEECEEECCCCCCEEECCCCCCCCCCEEE
ITRMDPSDIIVGLYNDTVKLKLKIAWADNNTLTMPFTTGYTVTVEPASSGANVNISAGSG
EEEECCCCEEEEEECCEEEEEEEEEEECCCEEEEEEECCEEEEEEECCCCCEEEEECCCC
NSVLINGVVSITSASSATQFTAGLRFLGCLLAGRGWNACAADYNSYLRGAGLYSFDLFVS
CEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEE
YDRKQTTCKPEDLTITLPNIALSELYNTGKVSNKNAADNIRLQCDNLFGNAKQTSRKMTV
ECCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEE
YLSSSDLIPDSYSVLRGAVNNGVGFILESGGKTVNISNTAEQGNASTLWKVDQVGTPLNS
EECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEHHCCCCCCC
DMITIPIIASYYVYDRDNIKPGDLKATALIYVKYD
CEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]