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The map label for this gene is yebR [H]

Identifier: 16765188

GI number: 16765188

Start: 1943986

End: 1944570

Strand: Reverse

Name: yebR [H]

Synonym: STM1847

Alternate gene names: 16765188

Gene position: 1944570-1943986 (Counterclockwise)

Preceding gene: 16765194

Following gene: 16765187

Centisome position: 40.03

GC content: 51.11

Gene sequence:

>585_bases
ATGACAGGAATAATCTTGAGCAAGAACGCATTTAATGCTTATTTTAATAGCCTGTGTTTAGGAGTAAGACCACGAAGTGA
TTATATAATGAGCAAAACAGAACTATACGCGGCGTTAAACCGCGATTTTCAGTCGTTAATGGCAGGTGAAACCAGCTTTC
TGGCCACGCTGGCGAATACCAGCGCGCTACTGTTCGAACGCCTTACCGAGGTGAACTGGGCGGGATTTTATCTCCTCGAA
GGCGATACGCTGGTGTTGGGGCCGTTTCAGGGGCGAATCGCCTGTGTGCGGATTCCGGTTGGTCGCGGCGTGTGTGGCGC
AGCGGTAGCGCAGAATAAGGTTCAACGTATTGATGATGTTCATGCGTTTGACGGCCATATTGCCTGTGATGCCGCCAGCA
ACGCCGAAATTGTGCTGCCTGTCACGGTTGGCGAACGGATTATCGGCGTGCTGGATATAGATAGCACGGCGTTTGGCCGT
TTTACCGAAGAAGATGAACACGGCCTGCGTACGCTGGTCGCACAGCTTGAAACCGTGCTTGCAACGACGGATTACAAAAA
ATTCTTTGCGAGCGTCGCAGGATAA

Upstream 100 bases:

>100_bases
CTAATTGACCTGATCGTTAGCTTTTTTGTTGGCGTGACGTGTGAGGTGTTCAGAGCCATGTATCGTGAATCAAAGTGTTA
GAATAATGTAATCTTAACTC

Downstream 100 bases:

>100_bases
TCAACGGATAACGTAGCAATTACTGATGGCGTCATTATAATGACGCCTGTTCATGCCTGCTGCTTGTTGGCTACGTCCGT
TGTAATCAGGAAATTTCATG

Product: nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTGIILSKNAFNAYFNSLCLGVRPRSDYIMSKTELYAALNRDFQSLMAGETSFLATLANTSALLFERLTEVNWAGFYLLE
GDTLVLGPFQGRIACVRIPVGRGVCGAAVAQNKVQRIDDVHAFDGHIACDAASNAEIVLPVTVGERIIGVLDIDSTAFGR
FTEEDEHGLRTLVAQLETVLATTDYKKFFASVAG

Sequences:

>Translated_194_residues
MTGIILSKNAFNAYFNSLCLGVRPRSDYIMSKTELYAALNRDFQSLMAGETSFLATLANTSALLFERLTEVNWAGFYLLE
GDTLVLGPFQGRIACVRIPVGRGVCGAAVAQNKVQRIDDVHAFDGHIACDAASNAEIVLPVTVGERIIGVLDIDSTAFGR
FTEEDEHGLRTLVAQLETVLATTDYKKFFASVAG
>Mature_193_residues
TGIILSKNAFNAYFNSLCLGVRPRSDYIMSKTELYAALNRDFQSLMAGETSFLATLANTSALLFERLTEVNWAGFYLLEG
DTLVLGPFQGRIACVRIPVGRGVCGAAVAQNKVQRIDDVHAFDGHIACDAASNAEIVLPVTVGERIIGVLDIDSTAFGRF
TEEDEHGLRTLVAQLETVLATTDYKKFFASVAG

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=165, Percent_Identity=84.2424242424242, Blast_Score=292, Evalue=8e-81,
Organism=Saccharomyces cerevisiae, GI6322781, Length=151, Percent_Identity=36.4238410596026, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 21032; Mature: 20901

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIILSKNAFNAYFNSLCLGVRPRSDYIMSKTELYAALNRDFQSLMAGETSFLATLANT
CCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SALLFERLTEVNWAGFYLLEGDTLVLGPFQGRIACVRIPVGRGVCGAAVAQNKVQRIDDV
HHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
HAFDGHIACDAASNAEIVLPVTVGERIIGVLDIDSTAFGRFTEEDEHGLRTLVAQLETVL
HCCCCEEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ATTDYKKFFASVAG
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TGIILSKNAFNAYFNSLCLGVRPRSDYIMSKTELYAALNRDFQSLMAGETSFLATLANT
CCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SALLFERLTEVNWAGFYLLEGDTLVLGPFQGRIACVRIPVGRGVCGAAVAQNKVQRIDDV
HHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
HAFDGHIACDAASNAEIVLPVTVGERIIGVLDIDSTAFGRFTEEDEHGLRTLVAQLETVL
HCCCCEEEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ATTDYKKFFASVAG
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]