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The map label for this gene is ompW [H]

Identifier: 16765076

GI number: 16765076

Start: 1827893

End: 1828531

Strand: Reverse

Name: ompW [H]

Synonym: STM1732

Alternate gene names: 16765076

Gene position: 1828531-1827893 (Counterclockwise)

Preceding gene: 16765081

Following gene: 16765065

Centisome position: 37.64

GC content: 53.21

Gene sequence:

>639_bases
ATGAAAAAATTTACAGTGGCGGCACTGGCGTTAACAACTCTTCTCTCAGGCAGCGCGTTCGCGCACGAAGCCGGAGAATT
CTTTATGCGTGCAGGTCCGGCAACCGTCAGACCTACAGAAGGGGCGGGTGGTACGCTGGGGCATTTAAACGGGTTTGATG
TGAGTAATAACACGCAACTCGGCCTGACATTCACTTACATGGCGACGGACAATATCGGGGTTGAATTGCTGGCGGCTACG
CCGTTCCGCCATAAGGTGGGTACGGGCGCGACGGGCGATATCGCCACGGTCCACCTGTTACCGCCAACGTTAATGGCGCA
GTGGTACTTCGGCGATTCCAGCAGCAAAGTGCGTCCTTATGTCGGCGTGGGGGTGAACTACACCACCTTCTTCGATAACG
ACTTTAACGATAATGGTAAAAATGCCGGGCTGTCCGATCTGAGCTTTAAGGATTCCTGGGGCGCGGCAGGGCAAGTTGGG
GTAGATTACCTGATTAACCGCGACTGGTTAATTGGCGCCTCTGTCTGGTACATGGATATTGATACTACCGCCAATTATAA
AATGGGCGGCGTTCAGCATCATGACAGCGTGCGTCTGGACCCATGGGTATTTATGTTCTCGGCAGGCTATCGTTTCTAA

Upstream 100 bases:

>100_bases
ATGTTAAATTATAAGAACAAATGTGATCTGTATTAGATCACTTATTACTTCATTGTGGGTATATTCATCACGCTTTTATA
ACCATAACGATGGAGCGGGT

Downstream 100 bases:

>100_bases
TCGCGTGATGTTGTGACGAAAAAAGACCCCGCCAGGCGGGGTCAAAAAAGGACATGACACACGGATTTTACTTGTCGGAA
CTCACTTGTCTTCTTTCGGT

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF

Sequences:

>Translated_212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF
>Mature_212_residues
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQLGLTFTYMATDNIGVELLAAT
PFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPYVGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSWGAAGQVG
VDYLINRDWLIGASVWYMDIDTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=88.6792452830189, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22958; Mature: 22958

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEE
GLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPY
EEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHEEEEEECCCCCCCCEE
VGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSWGAAGQVGVDYLINRDWLIGASVWYMDI
EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure
MKKFTVAALALTTLLSGSAFAHEAGEFFMRAGPATVRPTEGAGGTLGHLNGFDVSNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCCEE
GLTFTYMATDNIGVELLAATPFRHKVGTGATGDIATVHLLPPTLMAQWYFGDSSSKVRPY
EEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHEEEEEECCCCCCCCEE
VGVGVNYTTFFDNDFNDNGKNAGLSDLSFKDSWGAAGQVGVDYLINRDWLIGASVWYMDI
EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKMGGVQHHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]