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The map label for this gene is trpH

Identifier: 16765065

GI number: 16765065

Start: 1817408

End: 1818289

Strand: Reverse

Name: trpH

Synonym: STM1721

Alternate gene names: 16765065

Gene position: 1818289-1817408 (Counterclockwise)

Preceding gene: 16765076

Following gene: 16765064

Centisome position: 37.43

GC content: 56.01

Gene sequence:

>882_bases
ATGGGAGCCGCCTTGAGCGACACGAATTACGCAGTGATTTACGATCTGCACAGTCATACCACGGCGTCCGATGGACTGTT
GACGCCAGAAACATTAGTACACCGTGCGGTAGAGATGCGAGTCGGCACGCTGGCGATTACCGATCATGACACCACAGCCG
CGATTCCTGCGGCAAGAGAAGAAATTTCACGTTCCGGACTGGCCCTGAATCTTATTCCCGGCGTGGAGATTTCAACGGTC
TGGGAGAATCATGAGATTCACATTGTGGGTCTGAATATTGATATTGCGCATCCGGCAATGCGCGATTTTCTGGCGCAGCA
GACAGAGCGGCGTCAGGCACGCGGTCGGCTCATTGCGGAGCGTCTGGAAAAAGCCCATATTCCCGGCGCGTGGGAAGGGG
CATTGAGACTGGCCAATGGCGGCGCGGTGACGCGCGGCCACTTCGCCCGCTTTCTGGTGGAGTGCGGCAAAGCCGCGACC
ATGGCGGATGTTTTTAAAAAATATCTCGCGCGTGGGAAAACCGGTTACGTTCCGCCGCAGTGGTGTACAATAGAACAAGC
TATTGATGTCATTCATCATTCTGGCGGTAAGGCGGTGTTGGCCCATCCGGGACGCTACGACCTTAGCGCTAAGTGGCTGA
AAAGATTAGTGGCGCATTTTGCCGACCATCACGGCGACGCGATGGAAGTGGCGCAGTGCCAACAATCGCCCAATGAACGC
ACCCAACTGGCGACGCTTGCGCGTCAGCATCATTTATGGGCATCGCTTGGATCTGATTTCCATCAGCCCTGCCCGTGGAT
TGAGTTGGGGCGTAAACTCTGGCTGCCCGCTGGCGTTGAAGGCGTATGGCAGACATGGGAACAGCCGCAAATATCACAGT
GA

Upstream 100 bases:

>100_bases
AACTTTCGTACTAGTTAACTAGTTCGATGGAATAATGTCAACACCTATTTCAGTATATTTGCCGGAACCGTTATGATGTA
CATGACATAACTTTATCTCT

Downstream 100 bases:

>100_bases
GGGAAGTATGAGCCAGTTTTTTTATATCCATCCGGATAACCCACAGCAACGGCTGATTAATCAGGCCGTCGACATTGTGC
GTAAAGGCGGTGTTATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTV
WENHEIHIVGLNIDIAHPAMRDFLAQQTERRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAAT
MADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ

Sequences:

>Translated_293_residues
MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTV
WENHEIHIVGLNIDIAHPAMRDFLAQQTERRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAAT
MADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ
>Mature_292_residues
GAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTVW
ENHEIHIVGLNIDIAHPAMRDFLAQQTERRQARGRLIAERLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAATM
ADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNERT
QLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family

Homologues:

Organism=Escherichia coli, GI1787520, Length=286, Percent_Identity=91.6083916083916, Blast_Score=543, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRPH_SALTY (O54453)

Other databases:

- EMBL:   U92714
- EMBL:   AE006468
- RefSeq:   NP_460680.1
- ProteinModelPortal:   O54453
- PRIDE:   O54453
- GeneID:   1253240
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1721
- NMPDR:   fig|99287.1.peg.1667
- HOGENOM:   HBG403721
- OMA:   ITDHDSV
- ProtClustDB:   CLSK894084
- BioCyc:   STYP99287:STM1721-MONOMER
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195
- SMART:   SM00481

Pfam domain/function: PF02811 PHP; SSF89550 PHP-like

EC number: NA

Molecular weight: Translated: 32396; Mature: 32265

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAARE
CCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCHHCHHHHH
EISRSGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMRDFLAQQTERRQARGRLIAE
HHHHCCCEEEEECCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLARGKTGYVPPQ
HHHHHCCCCCCCHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
WCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ
HHHHHHHHHHHHHHHHCCHHCCCCCHHHHCHHHCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
GAALSDTNYAVIYDLHSHTTASDGLLTPETLVHRAVEMRVGTLAITDHDTTAAIPAARE
CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCHHCHHHHH
EISRSGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMRDFLAQQTERRQARGRLIAE
HHHHCCCEEEEECCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RLEKAHIPGAWEGALRLANGGAVTRGHFARFLVECGKAATMADVFKKYLARGKTGYVPPQ
HHHHHCCCCCCCHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
WCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLVAHFADHHGDAMEVAQCQQSPNER
CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
TQLATLARQHHLWASLGSDFHQPCPWIELGRKLWLPAGVEGVWQTWEQPQISQ
HHHHHHHHHHHHHHHHCCHHCCCCCHHHHCHHHCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609