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The map label for this gene is ydiV [H]

Identifier: 16765040

GI number: 16765040

Start: 1789095

End: 1789691

Strand: Reverse

Name: ydiV [H]

Synonym: STM1697

Alternate gene names: 16765040

Gene position: 1789691-1789095 (Counterclockwise)

Preceding gene: 16765041

Following gene: 16765033

Centisome position: 36.84

GC content: 48.24

Gene sequence:

>597_bases
ATGCGCTATTTTTTTATGGCAGAGCCGATAAGGGCAATGGAGGGGGATTTACTGGGTGTCGAAATCACTACCCATTTTGC
ATCGTCGCCCGCTCGTCCGCTACATCCTGAGTTTGTTATCTCGTCATGGGACAATTCGCAGAAGCGCCGTTTTCTGCTTG
ATCTGTTGCGGACAATCGCGGCCAAACATGGCTGGTTTCTACGCCACGGCCTATTCTGTATCGTAAATATTGATCGGGGT
ATGGCGCAGCTTGTCCTTCAGGATAAAGATATTCGCGCATTACTACACGCCATGCTATTTGTGGAGCTGCAGGTCGCTGA
ACATTTTTCATGTCAAGATAACGCCTTAATCGATCCTTTAATACACGCGCTTCATAAGCAACCTAATCCATTATGGCTGG
GCGACCTGGGCGTAGGGAATGCAACTGCTGCGCCATTAGTTTGCGGGTGTTTTAGCGGCGTAAAACTTGATCGCAGCTTT
TTTGTCTCACAAATTGAAAAAATGACGTTTCCGCTGCTTGTCAAACATATCCGGCGCGTTATTGTGACAAGATCGTGGTG
GGGGGCCAGGAAAACACACGCTATTTGCCGGTGTTAA

Upstream 100 bases:

>100_bases
TATTGTTTTTTCGATCATTTTTTATATATTGATCGTTTTTATTGATTGATTTGCGTTAAAAGCGCATTATCAGGGAGTTA
AGATCAAGTGGAGTGGTCAC

Downstream 100 bases:

>100_bases
AAACGGCAGGCATTTGGGCAACCCAGGGCACGTTATTTCCTTCCGTTGCGTTAGAAGAGGTTGAAACATTGCTGTTGGGC
AGTCGCATGAACACCCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRG
MAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
FVSQIEKMTFPLLVKHIRRVIVTRSWWGARKTHAICRC

Sequences:

>Translated_198_residues
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRG
MAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
FVSQIEKMTFPLLVKHIRRVIVTRSWWGARKTHAICRC
>Mature_198_residues
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIAAKHGWFLRHGLFCIVNIDRG
MAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPLIHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSF
FVSQIEKMTFPLLVKHIRRVIVTRSWWGARKTHAICRC

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=174, Percent_Identity=29.8850574712644, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 22571; Mature: 22571

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIA
CCEEEECCCHHHHCCCEEEEEEEEHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHH
AKHGWFLRHGLFCIVNIDRGMAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPL
HHCCHHHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSFFVSQIEKMTFPLLVKHIRRV
HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVTRSWWGARKTHAICRC
HHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MRYFFMAEPIRAMEGDLLGVEITTHFASSPARPLHPEFVISSWDNSQKRRFLLDLLRTIA
CCEEEECCCHHHHCCCEEEEEEEEHHCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHH
AKHGWFLRHGLFCIVNIDRGMAQLVLQDKDIRALLHAMLFVELQVAEHFSCQDNALIDPL
HHCCHHHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
IHALHKQPNPLWLGDLGVGNATAAPLVCGCFSGVKLDRSFFVSQIEKMTFPLLVKHIRRV
HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVTRSWWGARKTHAICRC
HHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]