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The map label for this gene is narV [H]

Identifier: 16764924

GI number: 16764924

Start: 1666661

End: 1667341

Strand: Direct

Name: narV [H]

Synonym: STM1580

Alternate gene names: 16764924

Gene position: 1666661-1667341 (Clockwise)

Preceding gene: 16764923

Following gene: 16764925

Centisome position: 34.31

GC content: 53.6

Gene sequence:

>681_bases
ATGATACAGTACCTGAACGTCTTTTTTTACGACATCTACCCCTATATTTGCGCCACGGTATTCTTCCTCGGCAGTTGGCT
GCGCTATGACTACGGACAATATACCTGGCGCGCGTCGTCCAGCCAGATGCTGGACAAGCGTGGGATGGTGATATGGTCGA
ATCTGTTCCATATTGGCATTCTGGGGATCTTCTTTGGCCATCTGTTTGGGATGCTAACGCCACACTGGATGTATGCCTGG
TTCCTGCCGATTGCGGTAAAGCAGCAGATGGCGATGATCCTCGGCGGCGTGTGCGGCGTATTAACGTTGATCGGCGGCGC
GGGATTACTGTGGCGTCGTCTGACCAATCAGCGTGTGCGGGCGACATCCACTACACCTGATATTATCATCATGAGCATTT
TGCTGATTCAGTGCCTGCTTGGCCTGAGCACCATTCCGTTTTCGGCGCAATATCCGGATGGCAGCGAAATGATGAAGTTG
GTGGGCTGGGCGCAAAGTATTGTCACCTTCCGCGGCGGGTCTTCGGAAATGCTGAGCGGTGTGGCGTTTGTTTTCCGCGT
TCATCTGGTGCTGGGAATGACTATTTTCCTGCTCTTCCCGTTCACCCGTCTGGTTCATGTCTGGAGCGCGCCGTTTGAGT
ATTTCACCCGTCGCTACCAGATTGTTCGTACCCGCCGCTAA

Upstream 100 bases:

>100_bases
ACGCCACGACCTGTGACAGTTCACCGTTACACCATTATCAACGACGCTTTAGCCAGGACGCGGCGCCGCAGTACGTCGAC
GTCAGCGCGGGAGGCCCGAA

Downstream 100 bases:

>100_bases
TTCTCTTTGCCCGGGGATACGCTTACCGGGCAAAGAAAAACGCCTGGGCGTCGTCATTCGGCAACGCACAGGCTATGATG
ATTCTTCAGTCAAAGGAGAA

Product: nitrate reductase 2 gamma subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAW
FLPIAVKQQMAMILGGVCGVLTLIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKL
VGWAQSIVTFRGGSSEMLSGVAFVFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRTRR

Sequences:

>Translated_226_residues
MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAW
FLPIAVKQQMAMILGGVCGVLTLIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKL
VGWAQSIVTFRGGSSEMLSGVAFVFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRTRR
>Mature_226_residues
MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAW
FLPIAVKQQMAMILGGVCGVLTLIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKL
VGWAQSIVTFRGGSSEMLSGVAFVFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRTRR

Specific function: This is a second nitrate reductase enzyme which can substitute for the NRA enzyme and allows E.coli to use nitrate as an electron acceptor during anaerobic growth. The gamma chain is a membrane-embedded heme-iron unit resembling cytochrome b, which transf

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787738, Length=226, Percent_Identity=96.4601769911504, Blast_Score=449, Evalue=1e-128,
Organism=Escherichia coli, GI1787480, Length=225, Percent_Identity=72, Blast_Score=342, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: =1.7.99.4 [H]

Molecular weight: Translated: 26048; Mature: 26048

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCHHHHHHHHHHHH
LGIFFGHLFGMLTPHWMYAWFLPIAVKQQMAMILGGVCGVLTLIGGAGLLWRRLTNQRVR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHC
ATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKLVGWAQSIVTFRGGSSEMLSG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
VAFVFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRTRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHCCHHHHHHHHHHHH
LGIFFGHLFGMLTPHWMYAWFLPIAVKQQMAMILGGVCGVLTLIGGAGLLWRRLTNQRVR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHC
ATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKLVGWAQSIVTFRGGSSEMLSG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
VAFVFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRTRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]