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The map label for this gene is yjgH [H]

Identifier: 16764894

GI number: 16764894

Start: 1626005

End: 1626394

Strand: Reverse

Name: yjgH [H]

Synonym: STM1549

Alternate gene names: 16764894

Gene position: 1626394-1626005 (Counterclockwise)

Preceding gene: 16764895

Following gene: 16764891

Centisome position: 33.48

GC content: 49.74

Gene sequence:

>390_bases
ATGACGCAACGTATCGCGGTTTTTCCTGCTGACCGCCATTCTCTGTATGAGGAACATGGGTATTCCGCAGCCATCCGTTC
TGGTGATTTACTGTTTGTTTCAGGCCAGGTAGGCAGTCACACAGACGGAACGCCGGAGCCTGATTTTCAAAAACAAGTGA
GGCTTGCTTTTGAAAACCTGAAAGCAACACTGACTGCAGCAGGATGCACATTCGATGACATAGTGGATGTCACCACCTTC
CATACCGATCCAGAGCAACAACTTAACGACGTGATGGCGGTGAAACAGGAGATATTTGCCCATCCCCCTTATCCTAACTG
GACCGCTGTTGGCGTTACCTGGCTGGCCGGCTTTGATTTCGAAATAAAGGTTATTGCCCGAATCCCCTGA

Upstream 100 bases:

>100_bases
CCTTGACATATGCCACGTATATGAAACTATGGCCTACGTTGTGTATGTGACATTCATTTTATTCCCGCCCGAAGTGTTTA
CGCTATCTGAGGATAACATT

Downstream 100 bases:

>100_bases
TGCTTATTCTCGGTAAAACCGGTAGCATTATATGTACCGGTTTTATTTTATTCATCCCTGCCCTTCATCTTGTATGATTA
ACATGCAATCACCAAACATA

Product: translation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTQRIAVFPADRHSLYEEHGYSAAIRSGDLLFVSGQVGSHTDGTPEPDFQKQVRLAFENLKATLTAAGCTFDDIVDVTTF
HTDPEQQLNDVMAVKQEIFAHPPYPNWTAVGVTWLAGFDFEIKVIARIP

Sequences:

>Translated_129_residues
MTQRIAVFPADRHSLYEEHGYSAAIRSGDLLFVSGQVGSHTDGTPEPDFQKQVRLAFENLKATLTAAGCTFDDIVDVTTF
HTDPEQQLNDVMAVKQEIFAHPPYPNWTAVGVTWLAGFDFEIKVIARIP
>Mature_128_residues
TQRIAVFPADRHSLYEEHGYSAAIRSGDLLFVSGQVGSHTDGTPEPDFQKQVRLAFENLKATLTAAGCTFDDIVDVTTFH
TDPEQQLNDVMAVKQEIFAHPPYPNWTAVGVTWLAGFDFEIKVIARIP

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=129, Percent_Identity=82.9457364341085, Blast_Score=229, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14336; Mature: 14205

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRIAVFPADRHSLYEEHGYSAAIRSGDLLFVSGQVGSHTDGTPEPDFQKQVRLAFENL
CCCEEEEEECCHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
KATLTAAGCTFDDIVDVTTFHTDPEQQLNDVMAVKQEIFAHPPYPNWTAVGVTWLAGFDF
HEEEEECCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCE
EIKVIARIP
EEEEEEECC
>Mature Secondary Structure 
TQRIAVFPADRHSLYEEHGYSAAIRSGDLLFVSGQVGSHTDGTPEPDFQKQVRLAFENL
CCEEEEEECCHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
KATLTAAGCTFDDIVDVTTFHTDPEQQLNDVMAVKQEIFAHPPYPNWTAVGVTWLAGFDF
HEEEEECCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCE
EIKVIARIP
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]