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The map label for this gene is yneE [H]

Identifier: 16764872

GI number: 16764872

Start: 1604153

End: 1605100

Strand: Direct

Name: yneE [H]

Synonym: STM1527

Alternate gene names: 16764872

Gene position: 1604153-1605100 (Clockwise)

Preceding gene: 16764871

Following gene: 16764875

Centisome position: 33.02

GC content: 45.99

Gene sequence:

>948_bases
ATGACAGTGCTTTTTCACCAGCTGAAGATAATCATGATCGTTAGACCACAACAGCACTGGATTCGCCTGATATTTGTCTG
GCATGGTTCCGTGTTATCTAAAATCTTTTCACGACTACTCCTTAACTTTCTTCTTTCTATCGCCGTTATTATCATGCTGC
CCTGGTACACAATGCTGGGTATTAAGTTTACCCTTGCGCCGTTTAGCATACTGGGCGTCGCTATCGCCATTTTTCTTGGG
TTTCGCAATAATGCCTGTTATGCGCGTTACGTCGAAGCCCGACATTTGTGGGGGCAGTTGATGATCGCTTCACGCTCAAT
ACTGCGAGAGGTGAAAACAACCTTGCCTGATGAACGCGGTATCGAGGATTTTGTTCGGTTACAAATCGCTTTTGCCCACT
GTTTGCGTATGACATTGCGTCGACAGCCTCAAACGCAAGTTCTGGGAAACTATCTTGACCAGGAGGCGTTACAGAAAGTT
GTCGCTTCCCATTCCCCCGCTAACCGTATCTTATTGCTGATGGGAGAGTGGCTGGCGATTCGCCGCCGCAGCGGAAAGCT
TTCCGATATTTTATTTCATAGCCTCAACAACCGCTTAAATGATATGTCGTCAGTATTGGCCGGCTGTGAGCGCATCGCCA
ACACGCCGGTGCCTTTTGCCTATACGTTAATTTTGCATCGTACGGTTTATCTTTTCTGCATTATGTTGCCATTTGCACTG
GTGGTTGATCTGCACTATATGACGCCGTTTATTTCGGTGCTGATTTCTTATACGTTTATCGCGCTGGATGCGTTAGCAGA
AGAGTTGGAAGATCCGTTCGGTACTGAAAATAATGATTTACCGCTGGATGCGATATGCAATGCGATAGAAATCGATTTAC
TGCAAATGAATGATGAAAGGGATATTCCGGCAAAACGGATACCGGATAAACGCTATCAACTGACCTGA

Upstream 100 bases:

>100_bases
TTTTTTTCAACGCCTGTCAGCACTGTGCAAAAAAATGTTCTACAGGGCAGGGAACCCGTGTATCACCAGAAGCTTGCAAC
CTTGATCTGGATCACGTTTA

Downstream 100 bases:

>100_bases
GCTCGACTTAACTGGCGCAGAATGTTCATCTGCGCCATAACCTGAATAGCAAAGTTTAATAGCCTTCTCCAACGCCGGTT
TTGGCTGGACCGGAGTAGTG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTVLFHQLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLGIKFTLAPFSILGVAIAIFLG
FRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKV
VASHSPANRILLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDIPAKRIPDKRYQLT

Sequences:

>Translated_315_residues
MTVLFHQLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLGIKFTLAPFSILGVAIAIFLG
FRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKV
VASHSPANRILLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDIPAKRIPDKRYQLT
>Mature_314_residues
TVLFHQLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLGIKFTLAPFSILGVAIAIFLGF
RNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERGIEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKVV
ASHSPANRILLLMGEWLAIRRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALV
VDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDIPAKRIPDKRYQLT

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=304, Percent_Identity=84.8684210526316, Blast_Score=535, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 36268; Mature: 36136

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLFHQLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLG
CCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKFTLAPFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC
DIPAKRIPDKRYQLT
CCCHHHCCCCCCCCC
>Mature Secondary Structure 
TVLFHQLKIIMIVRPQQHWIRLIFVWHGSVLSKIFSRLLLNFLLSIAVIIMLPWYTMLG
CCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKFTLAPFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREVKTTLPDERG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IEDFVRLQIAFAHCLRMTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRRSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVDLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC
DIPAKRIPDKRYQLT
CCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]