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The map label for this gene is ydiS [H]

Identifier: 16764703

GI number: 16764703

Start: 1432209

End: 1433495

Strand: Reverse

Name: ydiS [H]

Synonym: STM1352

Alternate gene names: 16764703

Gene position: 1433495-1432209 (Counterclockwise)

Preceding gene: 16764704

Following gene: 16764702

Centisome position: 29.51

GC content: 55.24

Gene sequence:

>1287_bases
ATGTCGGATGATAAATTTGACGCTATTGTGGTGGGCGCAGGCGTAGCAGGAACGGTCGCCGCGTATGTGATGGCAAAAGC
GGGACTGGATGTACTGGTTATTGAACGCGGAAACAGCGCGGGCAGCAAAAATATGACCGGTGGCCGGCTCTACGCTCACA
GTATCGAAAGTATTATGCCGGGATTCGCAACGTCCGCCCCCATCGAACGCGTCGTTACCCGTGAAAAAATCTCCTTTTTA
ACCGAAGAAAGCGCCGTCACACTTGATTTTCACCGCGCGCCCCCTACTCCGCCCCTTACGTCATATACCGTACTGCGCAA
CAAACTGGACCCGTGGTTAATGGCGCAGGCGGAACAGGCTGGCGCGCAGTTTATCCCAGGTGTACGGGTCGACGCTCTGG
TACGTGAAGGCAATCGCGTCACTGGCGTTCAGGCCGGGGATGATATTCTGGATGCGAATATTGTGATTCTCGCGGACGGC
GTGAATTCCATGCTGGGCCGTTCGCTGGACATGGTGCCTGTCTCTTCTGCGCATCACTATGCAGTCGGCGTAAAAGAGTT
GATTGGGCTCTCTCCGGCACTTATTGAAGAGCGCTTTAATCTGGCGTCCCATGAAGGCGCCGCCTGGTTATTCGCTGGCG
CGCCCTCCAACGGGCTCATGGGCGGCGGGTTTCTTTATACCAACCGCGATTCGGTTTCTCTGGGGCTGGTATGTGGCCTG
GGCGACATTGCTCACGCGACCAAAAGCGTACCGCAAATGCTGGAAGATTTTAAACAGCATCCGGCAATACGCCCTTTGAT
TCAGGGGGGAACACTGCTTGAATACTCCGCTCATATGGTGCCCGAAGGCGGCATAGCAATGATGCCGGAGCTGGCAAATG
ACGGCGTGATGATTGTCGGCGACGCCGCCGGTCTTTGTCTGAATCTCGGCTATACCGTCCGCGGCATGGATTTAGCCATC
GCGTCCGCGCAAGCGGCCGCTCAAACCGCCATTGACGCTAAAGCGCGGCAAGATTTTTCCGCCGCGAGTCTTGCCGGTTA
CAAACGCGCGCTGGAGAAAAACGGCGTGTTACGCGATATGCGGCATTTCCGCAAACTCCCCGGATTAATGGAAAACCCAC
GGCTTTTTACCGAGTACCCGCGTATGGCGGCAAACATTGTGGGCGATCTGTTCACCGTTGATGGCGGTCCAGTCCCACCG
TTGCGTAAAACTATCCTGTCACATGCGAAAAAAATTGGACTGGTGAATCTATTAAAAGACGGCATAAAAGGGGCTACGGC
ATTATGA

Upstream 100 bases:

>100_bases
TCTATAAGGTTGTTCCTGCCCTCATCGACCAGTTAAGCCGCTAATTCCTTTTTCAACGCACATCTCCCGTCGTCGATACG
GCGGGAAAGGAGCATAAAGC

Downstream 100 bases:

>100_bases
GTTCGGACAATAAGGTGAATGTTGACGTCAAATTGGGCGTAAATAAATTTTACGTAGATGAAGGACACCCACATATCATT
TTGCGCTCCTCGCCTGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFL
TEESAVTLDFHRAPPTPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILADG
VNSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCGL
GDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLAI
ASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVPP
LRKTILSHAKKIGLVNLLKDGIKGATAL

Sequences:

>Translated_428_residues
MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFL
TEESAVTLDFHRAPPTPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILADG
VNSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCGL
GDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLAI
ASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVPP
LRKTILSHAKKIGLVNLLKDGIKGATAL
>Mature_427_residues
SDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFLT
EESAVTLDFHRAPPTPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILADGV
NSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCGLG
DIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLAIA
SAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVPPL
RKTILSHAKKIGLVNLLKDGIKGATAL

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=400, Percent_Identity=24.75, Blast_Score=103, Evalue=4e-22,
Organism=Escherichia coli, GI1787991, Length=429, Percent_Identity=80.4195804195804, Blast_Score=701, Evalue=0.0,
Organism=Escherichia coli, GI1786227, Length=429, Percent_Identity=59.9067599067599, Blast_Score=518, Evalue=1e-148,
Organism=Escherichia coli, GI87082155, Length=428, Percent_Identity=42.2897196261682, Blast_Score=327, Evalue=9e-91,
Organism=Caenorhabditis elegans, GI25144720, Length=441, Percent_Identity=26.3038548752834, Blast_Score=114, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6324932, Length=421, Percent_Identity=25.6532066508314, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24652256, Length=407, Percent_Identity=26.2899262899263, Blast_Score=105, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45207; Mature: 45076

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMP
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
GFATSAPIERVVTREKISFLTEESAVTLDFHRAPPTPPLTSYTVLRNKLDPWLMAQAEQA
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHC
GAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILADGVNSMLGRSLDMVPVSSAHHY
CHHCCCCCHHHHHHHCCCEEEEECCCCCEECCCEEEEECCHHHHHCCCCCEEECCCCCHH
AVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCGL
HHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECC
GDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVG
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEHHHCCCCCCCEECCHHCCCCEEEEE
DAAGLCLNLGYTVRGMDLAIASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDM
CCCCEEEECCCEEECCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
RHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVPPLRKTILSHAKKIGLVNLLKD
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
GIKGATAL
CCCCCCCC
>Mature Secondary Structure 
SDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMP
CCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
GFATSAPIERVVTREKISFLTEESAVTLDFHRAPPTPPLTSYTVLRNKLDPWLMAQAEQA
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHC
GAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILADGVNSMLGRSLDMVPVSSAHHY
CHHCCCCCHHHHHHHCCCEEEEECCCCCEECCCEEEEECCHHHHHCCCCCEEECCCCCHH
AVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCGL
HHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECC
GDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVG
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEHHHCCCCCCCEECCHHCCCCEEEEE
DAAGLCLNLGYTVRGMDLAIASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDM
CCCCEEEECCCEEECCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
RHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVPPLRKTILSHAKKIGLVNLLKD
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
GIKGATAL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]