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The map label for this gene is pipA

Identifier: 16764445

GI number: 16764445

Start: 1175548

End: 1176228

Strand: Reverse

Name: pipA

Synonym: STM1087

Alternate gene names: NA

Gene position: 1176228-1175548 (Counterclockwise)

Preceding gene: 16764446

Following gene: 16764444

Centisome position: 24.22

GC content: 44.05

Gene sequence:

>681_bases
ATGCTTCCGGTCACCTACAGATTAATACCTCAAAGCGGAGTATCCACATATAGATTAAATACCGCAGATACACCTGTTTT
CCCCGATATTCCCGAACATGCACCAAACCCCTCACGGCTACGCCTTGCTCATGACAGCCTTGCCATAAACAGTGAATTCC
GTCTGGAGCCAGAGTGTGTGGTGGAGTACCTTATCTCAGGCGCGGGTGGAATAGACCCTGATACAGAAATTGATGACGAC
ACTTATGACGAATGCTACGATGAACTATCCTCCGTACTTCAAAATGCGTATACCCAAAGCGAAACATTCCGCAGACTGAT
GAATTACGCATATGAAAAAGAACTACATGATGTGGAGCAGCGCTGGCTACTGGGGGCAGGCGAAGCCTTTGAAACTACCG
TGGCTCAGGAACACTTCAAACTTTCAGAAGGCAGGAAAGTTATTTGTCTCAATCTGGACGATTCTGATGATTCATATACC
GAACATTATGAAAGTAACGAAGGAAGACAACTTTTTGACACAAAACGTTCATTTATTCATGAAGTTGTACATGCCCTGAC
CCATCTTCAGGATAAAGAAGAAAATCATCCAAGAGGCCCTGTTGTCGAATATACCAACATTATTCTGAAAGAGATGGGGC
ATCCTTCACCTCCCAGAATGGTCTACATCTTCAATAAATAG

Upstream 100 bases:

>100_bases
TGTCTGAATCATAGCGTTACCTGTATGTGGCACATTAACTAAAAACACTATTATTGTTTAATTTAAATAATTCATAATTG
TAGTCAGGAAATAAGAAGTT

Downstream 100 bases:

>100_bases
ACACATCGGGAAACGAAAAGAAACTAAAGACTCGCGTAGTCCGTTTTTTCGGGAAATATTCTAACAGTATTTTCTAACTA
TATTCTATAGCGCCTAAAAA

Product: pathogenicity island-encoded protein A

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDD
TYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

Sequences:

>Translated_226_residues
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDD
TYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK
>Mature_226_residues
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDD
TYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26009; Mature: 26009

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECV
CCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHEEECCCCCCCHHHH
VEYLISGAGGIDPDTEIDDDTYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQ
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYTEHYESNEGRQLFDTKRSFIH
HHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHH
EVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECV
CCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHEEECCCCCCCHHHH
VEYLISGAGGIDPDTEIDDDTYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQ
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYTEHYESNEGRQLFDTKRSFIH
HHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHH
EVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA