Definition Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession NC_003197
Length 4,857,432

Click here to switch to the map view.

The map label for this gene is 16764278

Identifier: 16764278

GI number: 16764278

Start: 987126

End: 987869

Strand: Direct

Name: 16764278

Synonym: STM0916

Alternate gene names: NA

Gene position: 987126-987869 (Clockwise)

Preceding gene: 16764277

Following gene: 39546305

Centisome position: 20.32

GC content: 56.85

Gene sequence:

>744_bases
ATGGGCGTACCCAACCCACTGATAAAAACCAAAGGCGCCGGGACCACGTTCTGGCTGTACACCGGACGTGGCGACGCGTT
TCACAACCCGCTGGCTGATGACGACTGGCTTCGCCTGGCAGGTATTAAAGATCTGCAGCCGGGTGAAATGACTGCCGATG
CGGAAGATGATGATTATCTTGATGATGAAGATGCTGACTGGAAAAGTACCACGCAGGGGCAGAAAAGTGTCGGTGATACC
ACGGCAACACTGGCCTGGAAACCGGGTGAAACCGGACAGAAGACGCTGGTGGATCTGTTTGACTCCGGCGAGGTCCGTGC
CTTTCGCATCAAATACCCCAATGGTACCGTCGATATCTTTCGCGGCTGGCTGAGTTCACTCGGTAAAACCATTACCGCCA
AAGAAGTGATGACGCGCACTGTGAAAATCAGTGGTGTCGGGCGTCCCTTCCTGGCTGAAGAAGATGCGCCGTCCGTGATC
AGTGTTTCCGGGGTGACCGTGGCGCCGTTAAATGCGTCGGTGGCTGTCGGGGCCACCACCACGCTGACTTTTACCCTCAA
ACCGGATGATGCCACGGACAAATCCCTGCGTATCGCATCATCCGATACCACGCTTGCCACCGTCACGCAAAAGGACAATG
TGGCCACCGTGAAAGGGGTGAAAGCGGGCAGCGTGACTGTCGTTGGTATCACCACGGACGGCAGCCTGGTCGCTGTGGCT
CCGGTCACGGTCACTGCCCCTTAA

Upstream 100 bases:

>100_bases
ACGCCGCTGGGTTATGACTACCAGCGCGACAGTGAAATGGCAACGTGGGGCATGGCAGAAATCACGTACCGGATCACCTA
CACCAACTGAGGATACTGTT

Downstream 100 bases:

>100_bases
TTTTCTTATTCCTGCCCCGGCTCCGGGGCTTTGCGGGAAAAATCATGTTTCTGAAAACCGATACCTTTACATACGGTGGT
CATTCCGCCGTGCTCAGTGA

Product: major tail protein

Products: NA

Alternate protein names: Gifsy-2 Prophage VmtV; Ig Domain-Containing Domain-Containing Protein; Tail-Like Protein; Tail Protein

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MGVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYLDDEDADWKSTTQGQKSVGDT
TATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIFRGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVI
SVSGVTVAPLNASVAVGATTTLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA
PVTVTAP

Sequences:

>Translated_247_residues
MGVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYLDDEDADWKSTTQGQKSVGDT
TATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIFRGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVI
SVSGVTVAPLNASVAVGATTTLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA
PVTVTAP
>Mature_246_residues
GVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYLDDEDADWKSTTQGQKSVGDTT
ATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIFRGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVIS
VSGVTVAPLNASVAVGATTTLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVAP
VTVTAP

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25951; Mature: 25820

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYL
CCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCC
DDEDADWKSTTQGQKSVGDTTATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIF
CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHEEECCCCEEEEEEECCCCCHHHH
RGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVISVSGVTVAPLNASVAVGATT
HHHHHHHCCEEEHHHHEEEEEEEECCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEE
TLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA
EEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEE
PVTVTAP
EEEEECC
>Mature Secondary Structure 
GVPNPLIKTKGAGTTFWLYTGRGDAFHNPLADDDWLRLAGIKDLQPGEMTADAEDDDYL
CCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCC
DDEDADWKSTTQGQKSVGDTTATLAWKPGETGQKTLVDLFDSGEVRAFRIKYPNGTVDIF
CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHEEECCCCEEEEEEECCCCCHHHH
RGWLSSLGKTITAKEVMTRTVKISGVGRPFLAEEDAPSVISVSGVTVAPLNASVAVGATT
HHHHHHHCCEEEHHHHEEEEEEEECCCCCCCCCCCCCCEEEECCEEEECCCCEEEECCEE
TLTFTLKPDDATDKSLRIASSDTTLATVTQKDNVATVKGVKAGSVTVVGITTDGSLVAVA
EEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCEEEEE
PVTVTAP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA