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The map label for this gene is stbA [H]

Identifier: 16763720

GI number: 16763720

Start: 384403

End: 384939

Strand: Reverse

Name: stbA [H]

Synonym: STM0340

Alternate gene names: 16763720

Gene position: 384939-384403 (Counterclockwise)

Preceding gene: 39546293

Following gene: 16763719

Centisome position: 7.92

GC content: 47.11

Gene sequence:

>537_bases
ATGTCTATGAAAAAATATTTAGCAATGATCACAGGCTCACTTCTTGTCTCCAGCAGCGCGATGGCTGTTTCTGATAACAC
CATCACCTTTCAAGGGGAAGTCTCTGATGAAACATGCTCTGTCGTTATTAATGGTAATCAGGCTAAACCCGTCGTGTTAT
TACCAACAGTAAGTACTAAAGATTTATCAGAACAAGGGAAAACCGCGGGGCCAATAACGTTTGATATTGGGCTGTCCGGG
TGTACCGGCTCTCAGGACAAAACAACAAAAATTTCCACTGTCTTTGTCGGTAATCAGGTCACCAGTAACGGTAACCTGGG
TAATACTGGCAGCGCGAAAAATGTTGAAGTCCAATTACTCGACACTTCAGGGGAGCCAATCAATCTGACCGGCGGCTTTA
CTGGCGACGGCGACCTACAGCTGGAACCAAATGCTTCTGAAGCGAGCGCGACTTATACCGCGCGGTATTACTCTACCGGG
AAAGCAGAGGCTGGGACAGTCGCTGCCACCCTTCAATACGCCGTTTCGTATAAATAA

Upstream 100 bases:

>100_bases
TTAATGATCGTTATTTTTACCACTCCTCCATAAGCACGAAACATTCGGGCGAATTGCACTCGTCCTGAAAAAGTAAAGAT
TAATACAGGAACATTATCAT

Downstream 100 bases:

>100_bases
TTGTCGCTACGGTCTGGCGTTGAAACGCCAGACCATTTTCAATCGCTAGGGAGTTGTTGAGATGAAAATGGATACCCGAC
ATTCCGCATTATATTACTTA

Product: fimbrial major subunit

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTKDLSEQGKTAGPITFDIGLSG
CTGSQDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTG
KAEAGTVAATLQYAVSYK

Sequences:

>Translated_178_residues
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTKDLSEQGKTAGPITFDIGLSG
CTGSQDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTG
KAEAGTVAATLQYAVSYK
>Mature_177_residues
SMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTKDLSEQGKTAGPITFDIGLSGC
TGSQDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLLDTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGK
AEAGTVAATLQYAVSYK

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18340; Mature: 18208

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTK
CCHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCC
DLSEQGKTAGPITFDIGLSGCTGSQDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLL
CHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEEEE
DTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGKAEAGTVAATLQYAVSYK
ECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
SMKKYLAMITGSLLVSSSAMAVSDNTITFQGEVSDETCSVVINGNQAKPVVLLPTVSTK
CHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCC
DLSEQGKTAGPITFDIGLSGCTGSQDKTTKISTVFVGNQVTSNGNLGNTGSAKNVEVQLL
CHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEEEE
DTSGEPINLTGGFTGDGDLQLEPNASEASATYTARYYSTGKAEAGTVAATLQYAVSYK
ECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]