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The map label for this gene is stfE [H]

Identifier: 16763588

GI number: 16763588

Start: 234749

End: 235261

Strand: Direct

Name: stfE [H]

Synonym: STM0198

Alternate gene names: 16763588

Gene position: 234749-235261 (Clockwise)

Preceding gene: 16763587

Following gene: 16763589

Centisome position: 4.83

GC content: 55.95

Gene sequence:

>513_bases
ATGAGGCAATGGCGGTTACGGCTGGGCACGGTAACGTGTGCGGCCATGCTGAGTGCGGTCAGTATGCCGCTGGCAGCGGG
AAGTAAGACGGTCAACATGACGCTGACGATAGTCGTTAATGCCGCGCCGCCCTGTACTGTGACCGGCGGTGAGGTGGAAT
TTGGCAATGTGTTGACGACGAAAGTGGATGGGGTGAATTACCGGCAGGCGGTGGGCTATCGCCTGAGCTGTAACGGCAGA
GTGAGCGATTACCTGAAGTTACAGATTCAGGGGAATGCGGTGACTATCAATGGCGAGTCGGTATTGCAAACCGATGTCGA
TGGATTGGGTATCCGTCTGCAAACCGCCACGGATGGCGCGCTGATTTCACCCGGCAATACGCAATGGTTGTCATTTCAAT
ACAGCGGCGGCAGCGGTCCGGCCATTGAGGCGATTCCCGTCAAAAATAATGGCGTAACGTTAACAGGTGGCGCGTTTAAC
GCAGGCGCCACGTTGGTGGTGGATTACCAATGA

Upstream 100 bases:

>100_bases
TTATGGCGCGCGGTTACCGCTGATTTTTAACTGTACTGACAACAGTTGTGCGGTAGATGAAGCAAAAAGCAGAAAGTCGT
AACCGACAAGGAGACGCAAG

Downstream 100 bases:

>100_bases
AAAAAATAGTTTTGACGATGTTAATGGGGGGCAGCCTTGCCGCACAGGCAGCCGATAATCTTAAGTTTCACGGCACATTA
ATTTCACCGCCGAATTGTAC

Product: minor fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRQWRLRLGTVTCAAMLSAVSMPLAAGSKTVNMTLTIVVNAAPPCTVTGGEVEFGNVLTTKVDGVNYRQAVGYRLSCNGR
VSDYLKLQIQGNAVTINGESVLQTDVDGLGIRLQTATDGALISPGNTQWLSFQYSGGSGPAIEAIPVKNNGVTLTGGAFN
AGATLVVDYQ

Sequences:

>Translated_170_residues
MRQWRLRLGTVTCAAMLSAVSMPLAAGSKTVNMTLTIVVNAAPPCTVTGGEVEFGNVLTTKVDGVNYRQAVGYRLSCNGR
VSDYLKLQIQGNAVTINGESVLQTDVDGLGIRLQTATDGALISPGNTQWLSFQYSGGSGPAIEAIPVKNNGVTLTGGAFN
AGATLVVDYQ
>Mature_170_residues
MRQWRLRLGTVTCAAMLSAVSMPLAAGSKTVNMTLTIVVNAAPPCTVTGGEVEFGNVLTTKVDGVNYRQAVGYRLSCNGR
VSDYLKLQIQGNAVTINGESVLQTDVDGLGIRLQTATDGALISPGNTQWLSFQYSGGSGPAIEAIPVKNNGVTLTGGAFN
AGATLVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=153, Percent_Identity=44.4444444444444, Blast_Score=147, Evalue=3e-37,
Organism=Escherichia coli, GI1788675, Length=139, Percent_Identity=34.5323741007194, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17697; Mature: 17697

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQWRLRLGTVTCAAMLSAVSMPLAAGSKTVNMTLTIVVNAAPPCTVTGGEVEFGNVLTT
CCEEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEECCCEEECCEEEE
KVDGVNYRQAVGYRLSCNGRVSDYLKLQIQGNAVTINGESVLQTDVDGLGIRLQTATDGA
EECCCCCHHHCCEEEEECCCCCEEEEEEECCCEEEECCCEEEEECCCCCEEEEEECCCCE
LISPGNTQWLSFQYSGGSGPAIEAIPVKNNGVTLTGGAFNAGATLVVDYQ
EECCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MRQWRLRLGTVTCAAMLSAVSMPLAAGSKTVNMTLTIVVNAAPPCTVTGGEVEFGNVLTT
CCEEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEECCCEEECCEEEE
KVDGVNYRQAVGYRLSCNGRVSDYLKLQIQGNAVTINGESVLQTDVDGLGIRLQTATDGA
EECCCCCHHHCCEEEEECCCCCEEEEEEECCCEEEECCCEEEEECCCCCEEEEEECCCCE
LISPGNTQWLSFQYSGGSGPAIEAIPVKNNGVTLTGGAFNAGATLVVDYQ
EECCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]