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The map label for this gene is stiH [H]

Identifier: 16763564

GI number: 16763564

Start: 203991

End: 205070

Strand: Reverse

Name: stiH [H]

Synonym: STM0174

Alternate gene names: 16763564

Gene position: 205070-203991 (Counterclockwise)

Preceding gene: 16763565

Following gene: 16763561

Centisome position: 4.22

GC content: 52.69

Gene sequence:

>1080_bases
ATGAAGAATTTATGGATGCTGCTGGCGCTATCGCTATTTTCAGGCCATGCGCTGGCAGACGGAACGATGGGCAACGGAAG
CGGCTGGTGTCAACCCACCAGCGGCACGCATAATTTCTTTTTTCCCCTTGACCAGACCATTACCGATACGGATGAGAACC
AGGCAGGGAAAATAGTCAAAGAGAGTTGGTCGGTCGGCGGCGAATACAGCGCCAGGTGCGACTGCGATAATAAAGATTAT
CAGGGCGTTAACTATTTCACCGCCACGACCGGCGATTTAACACAAAAAGGAACGTACAGCGAAGCGGGTAGCAATGGGCA
ACAGATGGATTTTTATGTTCTGGTCGCGGGTAAGCTGGAGATTGGTACGGAAACCTACATCGTCGGTAACCTGAAACAGT
ATATCCCCGTTCCCTTTTCAGCGATCAGTAATCAGGACCCCACCGCAGGCGGGTGTACGGGCGCGGACATAAACAAAATG
TCCGCAGGGAATAAGGGTAACGTGCGTATTTATATTACTCACCCATTGGTAGGTGAAATCACCATTCCTGAGACGACGAT
TATGAATCTCTATTTGTCAAAAACGCCGGGCAGCAGCGGAGATAATATTCCCCCTTCCGTTCCACCGATGGCGCACGTCA
CCATGTCCGGGACCATTACCGTGCCGCAGTCCTGCTCCATCAACGCCGGGCAGGTTATCGAGGTCAGGCTACCGGATATT
GAGGGCAAAGATATTCGTCACCTCGGCGACAGCCCGCAGAACTCGCACGTCACCACTCAGGTAAACTTTACCTGTAGCAA
CGTGGCGGACGGCACCAACCTGTCAATGTCATTAAATGGCGCAACCGATCCGCACAACCCGGACTACCTGAAAACTGACA
ATGAGAATTTGGGGATACGGATTTCCGATAAATACGATAATACCATCGTTCCCGGCGGCAGCGCCGAATTGCCGATTGAA
GATTACACTGACGGTAGAGGCAGCACCGAGTTCACCGCCGCGCCGGTCAATACCACCGGACATGTTCCCCACACCGGAGA
ATACCAGGCCACCGCCACGCTGGAGATTCAGATTCGCTGA

Upstream 100 bases:

>100_bases
ACTGGGGAAGCGCCTCTTGCCGCGCGGATTACCGCCTGGATATCAGCAAAAATATGAACGGCATAGTGATGGCGAACGCC
GTCTGCCAGTGAGGAACACA

Downstream 100 bases:

>100_bases
GAGAAGCGTTGGGTTTCGACAAGCCTCACCTACCGACCCGTAACCCATTGATATTACGGACCCGTAGATGAAGTGAAGCG
AAGCGCAACCCAACGCCCCA

Product: fimbrial protein precurosr

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKNLWMLLALSLFSGHALADGTMGNGSGWCQPTSGTHNFFFPLDQTITDTDENQAGKIVKESWSVGGEYSARCDCDNKDY
QGVNYFTATTGDLTQKGTYSEAGSNGQQMDFYVLVAGKLEIGTETYIVGNLKQYIPVPFSAISNQDPTAGGCTGADINKM
SAGNKGNVRIYITHPLVGEITIPETTIMNLYLSKTPGSSGDNIPPSVPPMAHVTMSGTITVPQSCSINAGQVIEVRLPDI
EGKDIRHLGDSPQNSHVTTQVNFTCSNVADGTNLSMSLNGATDPHNPDYLKTDNENLGIRISDKYDNTIVPGGSAELPIE
DYTDGRGSTEFTAAPVNTTGHVPHTGEYQATATLEIQIR

Sequences:

>Translated_359_residues
MKNLWMLLALSLFSGHALADGTMGNGSGWCQPTSGTHNFFFPLDQTITDTDENQAGKIVKESWSVGGEYSARCDCDNKDY
QGVNYFTATTGDLTQKGTYSEAGSNGQQMDFYVLVAGKLEIGTETYIVGNLKQYIPVPFSAISNQDPTAGGCTGADINKM
SAGNKGNVRIYITHPLVGEITIPETTIMNLYLSKTPGSSGDNIPPSVPPMAHVTMSGTITVPQSCSINAGQVIEVRLPDI
EGKDIRHLGDSPQNSHVTTQVNFTCSNVADGTNLSMSLNGATDPHNPDYLKTDNENLGIRISDKYDNTIVPGGSAELPIE
DYTDGRGSTEFTAAPVNTTGHVPHTGEYQATATLEIQIR
>Mature_359_residues
MKNLWMLLALSLFSGHALADGTMGNGSGWCQPTSGTHNFFFPLDQTITDTDENQAGKIVKESWSVGGEYSARCDCDNKDY
QGVNYFTATTGDLTQKGTYSEAGSNGQQMDFYVLVAGKLEIGTETYIVGNLKQYIPVPFSAISNQDPTAGGCTGADINKM
SAGNKGNVRIYITHPLVGEITIPETTIMNLYLSKTPGSSGDNIPPSVPPMAHVTMSGTITVPQSCSINAGQVIEVRLPDI
EGKDIRHLGDSPQNSHVTTQVNFTCSNVADGTNLSMSLNGATDPHNPDYLKTDNENLGIRISDKYDNTIVPGGSAELPIE
DYTDGRGSTEFTAAPVNTTGHVPHTGEYQATATLEIQIR

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787173, Length=343, Percent_Identity=27.1137026239067, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI145693100, Length=196, Percent_Identity=26.0204081632653, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789534, Length=207, Percent_Identity=28.9855072463768, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38385; Mature: 38385

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLWMLLALSLFSGHALADGTMGNGSGWCQPTSGTHNFFFPLDQTITDTDENQAGKIVK
CCHHHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCEEEEECCCEECCCCCCCCCCEEE
ESWSVGGEYSARCDCDNKDYQGVNYFTATTGDLTQKGTYSEAGSNGQQMDFYVLVAGKLE
HHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE
IGTETYIVGNLKQYIPVPFSAISNQDPTAGGCTGADINKMSAGNKGNVRIYITHPLVGEI
ECCEEEEEECHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCEEEE
TIPETTIMNLYLSKTPGSSGDNIPPSVPPMAHVTMSGTITVPQSCSINAGQVIEVRLPDI
ECCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECEEECCCCCCCCCCCEEEEECCCC
EGKDIRHLGDSPQNSHVTTQVNFTCSNVADGTNLSMSLNGATDPHNPDYLKTDNENLGIR
CCCHHHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCEEEE
ISDKYDNTIVPGGSAELPIEDYTDGRGSTEFTAAPVNTTGHVPHTGEYQATATLEIQIR
EECCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKNLWMLLALSLFSGHALADGTMGNGSGWCQPTSGTHNFFFPLDQTITDTDENQAGKIVK
CCHHHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCEEEEECCCEECCCCCCCCCCEEE
ESWSVGGEYSARCDCDNKDYQGVNYFTATTGDLTQKGTYSEAGSNGQQMDFYVLVAGKLE
HHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE
IGTETYIVGNLKQYIPVPFSAISNQDPTAGGCTGADINKMSAGNKGNVRIYITHPLVGEI
ECCEEEEEECHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCEEEE
TIPETTIMNLYLSKTPGSSGDNIPPSVPPMAHVTMSGTITVPQSCSINAGQVIEVRLPDI
ECCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECEEECCCCCCCCCCCEEEEECCCC
EGKDIRHLGDSPQNSHVTTQVNFTCSNVADGTNLSMSLNGATDPHNPDYLKTDNENLGIR
CCCHHHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCEEEE
ISDKYDNTIVPGGSAELPIEDYTDGRGSTEFTAAPVNTTGHVPHTGEYQATATLEIQIR
EECCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721701; 11677609 [H]