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The map label for this gene is bcfC [H]

Identifier: 16763413

GI number: 16763413

Start: 25803

End: 28424

Strand: Direct

Name: bcfC [H]

Synonym: STM0023

Alternate gene names: 16763413

Gene position: 25803-28424 (Clockwise)

Preceding gene: 16763412

Following gene: 16763414

Centisome position: 0.53

GC content: 54.46

Gene sequence:

>2622_bases
ATGCGTAATCAGCTTTTCATGACGCGATATTACTCCAGCGTAACTAAACCCGTATTAACCCCGCTGGCGTTGGCTATCGC
ACTGGCGCCTGCGCCGGGGTGGGCGGAAAACTATTTCAACCCGGCATTTCTGTCTGACGACCCGTCTGCGGTGGCCGACC
TATCGACCTTTTCCCGTAATGCCCAGGCGGCGGGGATGTATCGCGTTGACGTTTACCTGAACAATACGTTTCTCGCAACC
AGAGACATTGCCTTCCAGGCGGTGAAAACGACGGGAAAAAGCGCGCCCACCGATGACAGCGGATTACGCGCCTGCCTGAC
GCCTGAAATGCTTAAAAATATGGGGGTAAACACCGGGGCGTTTCCACTGTTGGCGAAGGCGGCGGCGGGAAGTTGCCCGG
ATCTCGCCAGTGCGATACCGGCCGCCCGGACCCGCTTTGATTTTGCGCAGCAACGTCTCGACATTAGCATCCCGCAGGCG
GCGATGGTTGCCAGCGCCAGAGGCTATATCCCACCGAAATACTGGGATGAAGGTATTAATGCGTTGCTATTGAATTACAC
CTTTACCGGCGCGAATAGTCAGGATCGGAGCCCAGGCGGCAGTGCGGAGAACAGCTATTTTCTTGGATTGAATAGCGGCC
TTAATCTGGGGGCCTGGCGGTTACGCGACTACTCCACATGGAACGCGAATAGCGGCGATCAGAATAGCGACAGCGACTGG
CAGCACATCAGTACTTATCTGGAACGTGATGTGGTCTTTTTGCAGGGAGAACTGACGGCAGGCGATAGTTATACCCCCTC
CGCATTATTCGACAGCCTTCCTTTTCGCGGGCTACAACTGGCGTCTGACGACAATATGTTGCCAGACAGCATGAAGGGCT
TCGCACCGACCATTCACGGCATTGCCAGAAGCAACGCGCAAGTGACCATTCGGCAAAACGGCTACATCATTAATCAGCGC
TATGTGCCGCCCGGGGCATTTACTATTAATGATCTCTATCCTACCGCCGCCAGCGGCGATTTGACTGTGGAAGTCAAAGA
GTCCGACGGTTCTATTAATCGTTATAACGTGCCCTATTCCGCCGTGCCGATTCTACAACGAGAAGGGCGGCTGAAGTATG
CGGCGACGGTGGCGGAGTATCGCAGCGATAGTAGTCAAAAAGAGAAGGTGAAATTCAGTCAGGCGACCTTGATATGGGGG
TTACCGCATGGTTTTACGCTGTATGGCGGAACACAACTTTCCAGTCATTATCACGCGCTGGCGATCGGCAGCGGCGCAAA
TCTGGGCGACTGGGGCGCGGTGTCGCTGGATGTCACCCAGGCTACCAGTACGCTGGCGGATAATAACACCTACCAGGGGC
AATCGCTGCGTTTCCTGTATGCCAAATCGCTTGCACAGTCAGGAACCAATTTACAGCTTATGGGCTATCGCTATTCAACC
TCGGGCTTTTACACGTTGGATGATACCACGTGGAAACGGATGAGCGGCTATGACGATGACAGTCGGACTGACAGCGATAA
AAGCAGGCCGGAATGGGCGGATTATTACAACCTTTATTACACCAGGAGGGGGAAAGTACAACTCGATATCAATCAACAGC
TAGGCGGGTTGGGATCGCTTTTTATTACCGGCAGCCAGCAAAGTTACTGGCACACTGATGAAAAGGATTCTTTGTTGCAG
GTGGGATACAGCGATACGCTGGCGGGTATTGCATGGAGCGTTTCTTACAACAATAACAAATCCGCAGGCGATGCGGAGCG
CGATCAAATTTTCGCGCTGAATATCTCGGTGCCGCTAAGTCAATGGCTGCAACACGGTGATGAGGTCACGCGCCATCACA
ATGTTTACGCTACCTTTAGCACCAGTACGGACAAACAGCATAACGTTACGCAGAATGCGGGCCTTAGCGGCACACTGCTG
GACGAAAACAATCTTAGTTACAACATACAGCAAGGTTATCAGAATCACGGTATTGGCGAAAGCGGCGCCGCTAGCCTGGA
ATACGATGGCGCGAAAGGCAACGCCAATATTGGCTATAACGTTAGCGATAACGGCGATTACCAGCAGGTGAATTATGGCC
TGAGTGGCGGCCTGGTGGCGCACGCGCATGGAGTGACGCTAAGCCAGCCGTTAGGCAATACCAATATTTTGATTGCCGCG
CCGGGCGCAGCCAATGTCGGCGTTGTCGACCAGCCGGGTATTCATACGGACGCGCGTGGCTATGCGGTGGTGCCGTATGC
GACAACATATCGCCAAAACCGTATGGCGCTGGACGTTAACGCCATGGCGGATGATGTCGATATTGATGACGCGGTGACTC
GCGTTGTGCCGACCGAAGGCGCGCTGGTTCTGGCCCGCTTTAAAGCGCGGGTCGGCGCGCGTGCCCTGGTAACGCTGAAT
CATAACGGTAAGCCTGTACCCTTTGGCGCAACGGTGACGGTGAATGATCGCCATGCGGAGGCGATTGTTGACGAGGCCGG
GGAGGTCTATCTTTCCGGGTTGTCAGCGCAAGGCGTTCTGCACGTTCGCTGGGGGAACCTACCGGATCAACAGTGCGTCG
CGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTGAGTCGACAACATGCGGAGTGTCATTAA

Upstream 100 bases:

>100_bases
GCGATCACTCTCCCGGCGACGCCCGGCCAGGTATCTTTGCGCACGGTAAACGATTTTGGCGCAACGACGCCAGCACGCGT
TTGTCCAGCTTCATGATGTT

Downstream 100 bases:

>100_bases
ATGAAAATACCTCTTTTATTTGCTCTGCTGGCGGGAAGTGTCGTATCGCAGTACGCCTTCGCAGACGTGTGTAAAAACGT
TAACGGCGTGCCTTCCAGTA

Product: fimbrial usher

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 873; Mature: 873

Protein sequence:

>873_residues
MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT
RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA
AMVASARGYIPPKYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW
QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR
YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG
LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST
SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ
VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHGDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLL
DENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA
PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLN
HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH

Sequences:

>Translated_873_residues
MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT
RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA
AMVASARGYIPPKYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW
QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR
YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG
LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST
SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ
VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHGDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLL
DENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA
PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLN
HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH
>Mature_873_residues
MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT
RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA
AMVASARGYIPPKYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW
QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR
YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG
LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST
SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ
VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHGDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLL
DENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA
PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLN
HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH

Specific function: Could be involved in the export and assembly of the putative ycbQ fimbrial subunit across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1787172, Length=845, Percent_Identity=53.2544378698225, Blast_Score=901, Evalue=0.0,
Organism=Escherichia coli, GI1790772, Length=860, Percent_Identity=51.2790697674419, Blast_Score=855, Evalue=0.0,
Organism=Escherichia coli, GI1786744, Length=855, Percent_Identity=46.7836257309941, Blast_Score=766, Evalue=0.0,
Organism=Escherichia coli, GI1789533, Length=865, Percent_Identity=39.1907514450867, Blast_Score=569, Evalue=1e-163,
Organism=Escherichia coli, GI1786332, Length=851, Percent_Identity=31.1398354876616, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1788427, Length=871, Percent_Identity=30.3099885189437, Blast_Score=352, Evalue=8e-98,
Organism=Escherichia coli, GI87081778, Length=827, Percent_Identity=28.415961305925, Blast_Score=254, Evalue=2e-68,
Organism=Escherichia coli, GI1789610, Length=764, Percent_Identity=25.9162303664921, Blast_Score=137, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 94774; Mature: 94774

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRN
CCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCEECCCCHHHHHHHHHCCC
AQAAGMYRVDVYLNNTFLATRDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGA
CCCCCEEEEEEEECCEEEEEHHHHHEEHHHCCCCCCCCCCCCEEECCHHHHHHCCCCCCC
FPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQAAMVASARGYIPPKYWDEGIN
HHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHCCCC
ALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW
EEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHH
QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHG
HHHHHHHHCCEEEEEEEECCCCCCCHHHHHHCCCCCCEEECCCCCCCCHHHHCCCHHHHH
IARSNAQVTIRQNGYIINQRYVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYS
HHCCCCEEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCH
AVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWGLPHGFTLYGGTQLSSHYHAL
HCCHHHCCCCEEEEHHHHHHHCCCCHHHHEEEEEEEEEEECCCCEEEECCCEECCCEEEE
AIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST
EECCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCEEEEEEEECC
SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSL
CCEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHCEEEEEEEECCCEEEEECCCCCCCEEE
FITGSQQSYWHTDEKDSLLQVGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLS
EEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCHH
QWLQHGDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLLDENNLSYNIQQGYQNHGIGE
HHHHCCHHHHHCCEEEEEEECCCCCCCCCHHCCCCEEEEEECCCCEEEECCCCCCCCCCC
SGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA
CCCCEEEECCCCCCCEECEEECCCCCEEEEEECCCCCEEEEECCCEEECCCCCCEEEEEC
PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEG
CCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEEEECCCCCCCCHHHHHEEECCCC
ALVLARFKARVGARALVTLNHNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVL
CEEEEEHHHCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEECCCCCCEE
HVRWGNLPDQQCVASYHLSSSRQILSRQHAECH
EEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRN
CCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCEECCCCHHHHHHHHHCCC
AQAAGMYRVDVYLNNTFLATRDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGA
CCCCCEEEEEEEECCEEEEEHHHHHEEHHHCCCCCCCCCCCCEEECCHHHHHHCCCCCCC
FPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQAAMVASARGYIPPKYWDEGIN
HHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHCCCC
ALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW
EEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHH
QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHG
HHHHHHHHCCEEEEEEEECCCCCCCHHHHHHCCCCCCEEECCCCCCCCHHHHCCCHHHHH
IARSNAQVTIRQNGYIINQRYVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYS
HHCCCCEEEEEECCEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCH
AVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWGLPHGFTLYGGTQLSSHYHAL
HCCHHHCCCCEEEEHHHHHHHCCCCHHHHEEEEEEEEEEECCCCEEEECCCEECCCEEEE
AIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST
EECCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCEEEEEEEECC
SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSL
CCEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHCEEEEEEEECCCEEEEECCCCCCCEEE
FITGSQQSYWHTDEKDSLLQVGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLS
EEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCHH
QWLQHGDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLLDENNLSYNIQQGYQNHGIGE
HHHHCCHHHHHCCEEEEEEECCCCCCCCCHHCCCCEEEEEECCCCEEEECCCCCCCCCCC
SGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA
CCCCEEEECCCCCCCEECEEECCCCCEEEEEECCCCCEEEEECCCEEECCCCCCEEEEEC
PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEG
CCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEEEECCCCCCCCHHHHHEEECCCC
ALVLARFKARVGARALVTLNHNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVL
CEEEEEHHHCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEECCCCCCEE
HVRWGNLPDQQCVASYHLSSSRQILSRQHAECH
EEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]