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The map label for this gene is tlpA [H]

Identifier: 167626003

GI number: 167626003

Start: 5001080

End: 5001676

Strand: Reverse

Name: tlpA [H]

Synonym: Shal_4098

Alternate gene names: 167626003

Gene position: 5001676-5001080 (Counterclockwise)

Preceding gene: 167626004

Following gene: 167626002

Centisome position: 95.69

GC content: 44.05

Gene sequence:

>597_bases
ATGAGATCGACCATAGTGGGTCTAGTTGCAGCAACGATGTTGGTTGCTGCTGGGGCGCAGGCCTATCCTGGAATGGAAAA
GCAAGCTGAAAGCCAAGTTCAATCTAGTGTCGATCTTATTAGTGTTTTGCCAAAGCCGTTTCCGATTGAAGCTGTACCCT
TTAAAGATAGTAAAGGTGAGGCTGTCGACTTTAGCCAGTATAAAGGTAAAGTCATCATGGTTAACATGTGGGCCACTTGG
TGTCCTCCATGTGTAAGAGAGTTACCGGCTATCAGTCGCTTCTCAGCCAAGATCGGATCTGATGACTTTGAAGTGTTACC
TGTATCTATCGATCTAGAGGGTAATAAGCAGGTAGAGCCATTCCTAAAGTCATTAGGAATGGAAGGCTTCAATACCTATT
ATGATAAAGAGCAGAAATTGGGTCATGTATTTCCTTTAGATACGATACCCGCCACCTTTATCCTTAACAGGGAAGGGGAG
CTAATCGCTTTCGTTCGTACCTTTGTTGATTGGGACGATGATAAAGCGGTGACTCTTATTAAGGAGTTTCTTGCAGAACC
TCAGTCATCAAACCAAGTCACAAAGAACGCTGACTAG

Upstream 100 bases:

>100_bases
TCTTCTTTATCCGCAAGCAGCGCATAGCAGAATCGAACAATCAAGAGCTATCAAGTGAAGAACAGCAAGAGTTAGATCGT
CTATTAAAGCGAGACGCTAA

Downstream 100 bases:

>100_bases
ATTTAATAGCATTAATGATGGTGAAAAAAGGGGCTTTCAGCCCCTTTTTTGTACGTATCGTCTGATAACTACACGCTTGA
TTCATAAAAGCTAATTTTAT

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: Cytochrome c biogenesis protein tlpA [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRSTIVGLVAATMLVAAGAQAYPGMEKQAESQVQSSVDLISVLPKPFPIEAVPFKDSKGEAVDFSQYKGKVIMVNMWATW
CPPCVRELPAISRFSAKIGSDDFEVLPVSIDLEGNKQVEPFLKSLGMEGFNTYYDKEQKLGHVFPLDTIPATFILNREGE
LIAFVRTFVDWDDDKAVTLIKEFLAEPQSSNQVTKNAD

Sequences:

>Translated_198_residues
MRSTIVGLVAATMLVAAGAQAYPGMEKQAESQVQSSVDLISVLPKPFPIEAVPFKDSKGEAVDFSQYKGKVIMVNMWATW
CPPCVRELPAISRFSAKIGSDDFEVLPVSIDLEGNKQVEPFLKSLGMEGFNTYYDKEQKLGHVFPLDTIPATFILNREGE
LIAFVRTFVDWDDDKAVTLIKEFLAEPQSSNQVTKNAD
>Mature_198_residues
MRSTIVGLVAATMLVAAGAQAYPGMEKQAESQVQSSVDLISVLPKPFPIEAVPFKDSKGEAVDFSQYKGKVIMVNMWATW
CPPCVRELPAISRFSAKIGSDDFEVLPVSIDLEGNKQVEPFLKSLGMEGFNTYYDKEQKLGHVFPLDTIPATFILNREGE
LIAFVRTFVDWDDDKAVTLIKEFLAEPQSSNQVTKNAD

Specific function: Involved in cytochrome aa3 assembly [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 21896; Mature: 21896

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSTIVGLVAATMLVAAGAQAYPGMEKQAESQVQSSVDLISVLPKPFPIEAVPFKDSKGE
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
AVDFSQYKGKVIMVNMWATWCPPCVRELPAISRFSAKIGSDDFEVLPVSIDLEGNKQVEP
EECHHHHCCEEEEEECCCHHCCHHHHHCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
FLKSLGMEGFNTYYDKEQKLGHVFPLDTIPATFILNREGELIAFVRTFVDWDDDKAVTLI
HHHHCCCCCHHHHHCHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHH
KEFLAEPQSSNQVTKNAD
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSTIVGLVAATMLVAAGAQAYPGMEKQAESQVQSSVDLISVLPKPFPIEAVPFKDSKGE
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
AVDFSQYKGKVIMVNMWATWCPPCVRELPAISRFSAKIGSDDFEVLPVSIDLEGNKQVEP
EECHHHHCCEEEEEECCCHHCCHHHHHCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHH
FLKSLGMEGFNTYYDKEQKLGHVFPLDTIPATFILNREGELIAFVRTFVDWDDDKAVTLI
HHHHCCCCCHHHHHCHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHH
KEFLAEPQSSNQVTKNAD
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8253065; 12597275 [H]