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The map label for this gene is ybiI [H]

Identifier: 167625939

GI number: 167625939

Start: 4915181

End: 4915447

Strand: Reverse

Name: ybiI [H]

Synonym: Shal_4034

Alternate gene names: 167625939

Gene position: 4915447-4915181 (Counterclockwise)

Preceding gene: 167625940

Following gene: 167625938

Centisome position: 94.04

GC content: 50.94

Gene sequence:

>267_bases
ATGGCAGGTGGATGGTCAAGAGACGGTGCGGTGCAAGATCAAATCGACAGCAGTGTTGAAGATGCAGTCGCAACCGCGAG
AAGTAGGCTTGTTGGCGGGGTTAGCTTGTTACATTGTGAAGAGTGTGGTGAGGAGATCCCCGAGGCTAGGCGTATTGCCG
TACCCGGTGTTCGACTCTGTATTCATTGTCAAAATGAACTCGATAGCACTCAGGCAAAGCAGCATCTGTTTAATCGCCGA
GGCAGTAAGGATAGCCAGCTACGTTAA

Upstream 100 bases:

>100_bases
GTTGTCAGTTAGAGAGGAACTCTAATCTTCAACTATAGATGAAGGGCTGTTAAATCGATTCATGCTCGGCAACTGCTAAT
TGTCATAGAGAGGTACTAAC

Downstream 100 bases:

>100_bases
TCAGGCTGCCAAGAAAGTGAATATCAAAACAGTTAACGGCTTGGCTTGAGCAGAGATCAGGCCAAAGACACTTCAGCTAT
AAATAATGAAGTGGCTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAGGWSRDGAVQDQIDSSVEDAVATARSRLVGGVSLLHCEECGEEIPEARRIAVPGVRLCIHCQNELDSTQAKQHLFNRR
GSKDSQLR

Sequences:

>Translated_88_residues
MAGGWSRDGAVQDQIDSSVEDAVATARSRLVGGVSLLHCEECGEEIPEARRIAVPGVRLCIHCQNELDSTQAKQHLFNRR
GSKDSQLR
>Mature_87_residues
AGGWSRDGAVQDQIDSSVEDAVATARSRLVGGVSLLHCEECGEEIPEARRIAVPGVRLCIHCQNELDSTQAKQHLFNRRG
SKDSQLR

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1787022, Length=88, Percent_Identity=60.2272727272727, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 9617; Mature: 9486

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGWSRDGAVQDQIDSSVEDAVATARSRLVGGVSLLHCEECGEEIPEARRIAVPGVRLC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHEECCCCHHEE
IHCQNELDSTQAKQHLFNRRGSKDSQLR
EECCHHCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AGGWSRDGAVQDQIDSSVEDAVATARSRLVGGVSLLHCEECGEEIPEARRIAVPGVRLC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHEECCCCHHEE
IHCQNELDSTQAKQHLFNRRGSKDSQLR
EECCHHCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]