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The map label for this gene is 167625746

Identifier: 167625746

GI number: 167625746

Start: 4664484

End: 4665050

Strand: Reverse

Name: 167625746

Synonym: Shal_3841

Alternate gene names: NA

Gene position: 4665050-4664484 (Counterclockwise)

Preceding gene: 167625747

Following gene: 167625745

Centisome position: 89.25

GC content: 49.91

Gene sequence:

>567_bases
ATGTTCCATAACAGCATGCGATTCCTCTCTAGCCGCAACCGTGTCTCTCTGAAAGCTTTGGGGTCTATGAGCTCAGGCTC
TATGAACTCAGGCTCTAGTATGAGCTCTGGGCAGCGCGGTAGCGCCTTGATAATCGGTGTATTCATCATCACGGTGATGT
TTCTGTTGGCAGCGACACTGATTAATGTATTGGATGATGCCGATCAAGAGATCAGCATAGAGGTTTGGGGCACTCGCGCC
TTTGCGGTAGCAAATAGCGGTGCGGATCGCGCCTTAGCGACTCTGTTTCCTGTCGATGGCAGCAGCGGCAGTTGTAATAC
TCTGCCACCTTGGAATACTCCTTGGAATATCGGAAATGAAACTGGTCTTGTCGGTTTTCATGGCTGCGAAGTGCTGATGA
CTTGCTCTGCAACAACCGCAACAACTAATTCATCACAAAATGAGATGACCCAATATTTGATTACCAGCACCGCAACCTGT
AGTACAGGCCAATGTGATTCCGGTCGTGATAGCGATGCCAGCTGTATTCGAGTGAGCCGTCAGGTGGAGGTCGAAGCCCG
TGATTAA

Upstream 100 bases:

>100_bases
ACCCCGGGGACGCTACGCAACAATGCCATGGTGCATCTGAGTCCGTTGTTTGATGTGCAAGGGCAAACGTTTCAATATCA
TCATCAAGTGCAGGTGATTA

Downstream 100 bases:

>100_bases
AATGGTACGTTCAATCCAATTTTTCCTATTGATATTTGTATCTGTATTATTTGCAGGAAGTGCAATGGCGGCCGATTGGA
CGCAAACTTTTAAAGAGGGG

Product: MSHA biogenesis protein MshP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFHNSMRFLSSRNRVSLKALGSMSSGSMNSGSSMSSGQRGSALIIGVFIITVMFLLAATLINVLDDADQEISIEVWGTRA
FAVANSGADRALATLFPVDGSSGSCNTLPPWNTPWNIGNETGLVGFHGCEVLMTCSATTATTNSSQNEMTQYLITSTATC
STGQCDSGRDSDASCIRVSRQVEVEARD

Sequences:

>Translated_188_residues
MFHNSMRFLSSRNRVSLKALGSMSSGSMNSGSSMSSGQRGSALIIGVFIITVMFLLAATLINVLDDADQEISIEVWGTRA
FAVANSGADRALATLFPVDGSSGSCNTLPPWNTPWNIGNETGLVGFHGCEVLMTCSATTATTNSSQNEMTQYLITSTATC
STGQCDSGRDSDASCIRVSRQVEVEARD
>Mature_188_residues
MFHNSMRFLSSRNRVSLKALGSMSSGSMNSGSSMSSGQRGSALIIGVFIITVMFLLAATLINVLDDADQEISIEVWGTRA
FAVANSGADRALATLFPVDGSSGSCNTLPPWNTPWNIGNETGLVGFHGCEVLMTCSATTATTNSSQNEMTQYLITSTATC
STGQCDSGRDSDASCIRVSRQVEVEARD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19867; Mature: 19867

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHNSMRFLSSRNRVSLKALGSMSSGSMNSGSSMSSGQRGSALIIGVFIITVMFLLAATL
CCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
INVLDDADQEISIEVWGTRAFAVANSGADRALATLFPVDGSSGSCNTLPPWNTPWNIGNE
HHHHCCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
TGLVGFHGCEVLMTCSATTATTNSSQNEMTQYLITSTATCSTGQCDSGRDSDASCIRVSR
CCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
QVEVEARD
EEEEEECC
>Mature Secondary Structure
MFHNSMRFLSSRNRVSLKALGSMSSGSMNSGSSMSSGQRGSALIIGVFIITVMFLLAATL
CCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
INVLDDADQEISIEVWGTRAFAVANSGADRALATLFPVDGSSGSCNTLPPWNTPWNIGNE
HHHHCCCCCEEEEEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
TGLVGFHGCEVLMTCSATTATTNSSQNEMTQYLITSTATCSTGQCDSGRDSDASCIRVSR
CCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
QVEVEARD
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA