Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625707

Identifier: 167625707

GI number: 167625707

Start: 4618466

End: 4618747

Strand: Reverse

Name: 167625707

Synonym: Shal_3802

Alternate gene names: NA

Gene position: 4618747-4618466 (Counterclockwise)

Preceding gene: 167625709

Following gene: 167625706

Centisome position: 88.36

GC content: 50.0

Gene sequence:

>282_bases
ATGAGTAGCGTAAAGCAGAAACTGGTAATGGGGCTTGTTGCCGTATTCCTGTGTCTGTCATTTGCCGCGTCCGCTCATAG
TTTGAGTCATTTGGACGATGGCGCTAAAACCCATTGTACTCTGTGTTATCACCAACACCAGGTCAACAACCTGCTGCCGA
GTTGTGAGCTTCACATCGCTGTAGAGCGTCAGGGAGTTGTCAGCCAAGAGTACATCCTTCCACACTCCTACTCACGTCAT
GTGAGTTTCTTTAACAGTCGCGCCCCTCCAGCTTCAGCCTAA

Upstream 100 bases:

>100_bases
CAAAGCGTTTGTAACACAGAGTCACTTCTAGGCTTGACTTCAATTCTTATCCACATAAACTTGTCATGTTTTAATACACA
AGGTTAACACTGTGATTCGA

Downstream 100 bases:

>100_bases
TTCTTTACTAACAACACAAATTTAAGAATTTTCAAAGTATTCCCACGAGGAAGACTTAGCTGTATTTCGGAGAAAAGATG
ACTATTTCAACTATGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIAVERQGVVSQEYILPHSYSRH
VSFFNSRAPPASA

Sequences:

>Translated_93_residues
MSSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIAVERQGVVSQEYILPHSYSRH
VSFFNSRAPPASA
>Mature_92_residues
SSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIAVERQGVVSQEYILPHSYSRHV
SFFNSRAPPASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10219; Mature: 10088

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCEEEEE
VERQGVVSQEYILPHSYSRHVSFFNSRAPPASA
ECCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSVKQKLVMGLVAVFLCLSFAASAHSLSHLDDGAKTHCTLCYHQHQVNNLLPSCELHIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCEEEEE
VERQGVVSQEYILPHSYSRHVSFFNSRAPPASA
ECCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA