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The map label for this gene is chiD [H]

Identifier: 167625650

GI number: 167625650

Start: 4544402

End: 4546585

Strand: Reverse

Name: chiD [H]

Synonym: Shal_3745

Alternate gene names: 167625650

Gene position: 4546585-4544402 (Counterclockwise)

Preceding gene: 167625653

Following gene: 167625649

Centisome position: 86.98

GC content: 50.27

Gene sequence:

>2184_bases
ATGAAATCACTCAAACTTAATCTACTTGGCGCAAGCATAGCCTTGGCAATGGGCGCGGTTTCGGCGCCAGCGATGGCCAA
TGGCGTTGATATGATTAACCCACAAGCGGGGGTTGTTGTGGGTTACTGGCATAACTGGTGTGGCGGCGCGGGCTATAAAG
GTGGTGTCGCCCCTTGTGTGACCTTAACTGAGGTCGATCCGCAATATAACGTGGTCGATGTGTCGTTTATGAAGGTCTAC
GGCGCAGTCGGCACCATTCCTACCTTTAAACTCGATCCTGAAATTGGTTTAACCGAAGCACAATTTATTGAGCAGATCGG
CGAGCTCAACCGCCAAGGCCGTTCGGTATTGATCGCCTTAGGCGGCGCCGATGCTCATATCGAGCTACGCAGTGGTCAAG
AGCAAGCTTTAGCCAGTGAGATTATTCGTCTTGTCGAAGTCTATGGCTTTGATGGTCTAGATATCGATTTAGAGCAAGCG
GCGGTGACCGCTGCAGACAACCAAACCGTTATTCCTGCGGCGCTGCGTATCGTTAAAGATTACTACCGTGAGCAGGGCAA
AAACTTCTTGATCACCATGGCGCCAGAATTTCCGTACCTGACAACAGGCGGTAAGTATGTGCCTTATATCACCGCGCTAG
AGGGCTATTATGACTGGATTAACCCACAGTTTTATAACCAAGGCGGCGATGGTATCTATATCGAGGGGCTAGGTTGGGTT
GCGCAAAACAACGATAACCTTAAGCAGGAGTTTATCTATCATATTGCCGATGCCTTATCTAACGGCACCAACGGCTTTAC
CAAGATCCCCCACGATAAGTTAGTGTTTGGTATTCCAACTAATATCGACGCCGCAGCAACGGGTTATATCAATGAGCCGC
AAAAGCTATATGCGGCATTTGAGCAATTAAAAGCGCAGGGTCAGCCGCTACGTGGTGTGATGACTTGGTCGGTTAACTGG
GATATGGGACAGAGCTCTGCGGGTCAGGCGTACAACGAATCATTTATTAAGGCTTATGGTCCATTCATTCATGGTCAAGA
TATTCTGCCGCCAGAGCCAGATAACGGTAAGCCAATTTTCTCAGGGCTTAGCAACACTCGCGTTAAGTTAGGCGCAGAGT
TTGATGCACTGGCGGGCGTAAATGCTCGTGATATGGAAGATGGTGACATCACATCAAGTATTCAAGTTGAAGGCTCGGTC
GATACTCTGACCTTAGGTTTGTATGCACTGACTTATCGCGTAAGTGATAGTGATGACAACCTAACTGAGCAGGTGCGCAC
GGTAGAGGTATACAACACTAAACCTGAGCTTAAGGGTGTCGCCAACGCTAGCGTATTACTGGGCAGTGTTTTCGATGCAT
TAGCGGGCGTGAGTGCTATCGACGCCGAAGATGGTGACCTAACGGCGCAAGTTAGTGTCGAAGGTGATGTGGATACCAGC
AGCGTAGGTCAGTACCTACTAACCTATCGCGTCAGTGATAGTGCAGCTCAGCAAGTTGAGGTGTTACGAACCATCACAGT
AAAAGAGCAGGGCGCGGTGTGCGATAACGCTTGGGATGCGACAACCACCTATCTTGGCGGTGAAACAGTAAGCCATGCTA
GTAAGAGCTGGTTAGCGGGCTGGTGGACTCAAGGTGATGAGCCGGGTACCACAGGTGAGTGGGGCGTTTGGAAAGCCCAA
GGTGATAGCGATTGTGATGGTGGTCTGCCGCCAGTGGTAAAGCCGACACTTGATATAAGCGGTATTGCACCGCGCTATGT
GCTTGAGCAAGGCAGTGTGTCTATTGAGTTTAGCGCTAGCGTTAACCAAACTATGGTAGTTAATGCTAGCTTAGTGCAAG
GCAGCACTGTGTTTGCAAGTAGTGAAGTCAGCGTAGCTAGCTCAGCAGCTATGACTCTATCTGCAACGGATTTAGCGGCA
GGCAGCTATGAAGTCGTAGTGAGCGCACCAGAACAGGAACTGATTCGTCGTACTAGCATTAGCTTGGTTGAAGAAGATAG
CGAGGGCGGCGACTATCCAGCTTACGCGGCAGGCACAAATTACCAAGCGGGTGACGTAGTCACTAATGCTGGCGGTGTAT
ATGAGTGCCTACCTTGGCCAAACAGCGGCTGGTGTAGTGGCGCTGCGAGTCATTATGCGCCAGGTACAGGTAGTGCGTGG
CAAGATGCCTGGTTTGCTCGTTAA

Upstream 100 bases:

>100_bases
AGCAACTCCTACGGCAGTGGCGCTACCGCAAGTGACACGGGCAGCAGATATTACCTGCCTGTTTGTTGCTTTTCGATATT
GAATGAAAAGGGATGAATTA

Downstream 100 bases:

>100_bases
TCGTGAATGCTATGATTGTATAGCATGAACACGCTAAAGCCTCGTCGATGTGACGGGGCTTTTTTACGCAATAAATACAT
AGCTAATTTATTCTTTATTT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MKSLKLNLLGASIALAMGAVSAPAMANGVDMINPQAGVVVGYWHNWCGGAGYKGGVAPCVTLTEVDPQYNVVDVSFMKVY
GAVGTIPTFKLDPEIGLTEAQFIEQIGELNRQGRSVLIALGGADAHIELRSGQEQALASEIIRLVEVYGFDGLDIDLEQA
AVTAADNQTVIPAALRIVKDYYREQGKNFLITMAPEFPYLTTGGKYVPYITALEGYYDWINPQFYNQGGDGIYIEGLGWV
AQNNDNLKQEFIYHIADALSNGTNGFTKIPHDKLVFGIPTNIDAAATGYINEPQKLYAAFEQLKAQGQPLRGVMTWSVNW
DMGQSSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIFSGLSNTRVKLGAEFDALAGVNARDMEDGDITSSIQVEGSV
DTLTLGLYALTYRVSDSDDNLTEQVRTVEVYNTKPELKGVANASVLLGSVFDALAGVSAIDAEDGDLTAQVSVEGDVDTS
SVGQYLLTYRVSDSAAQQVEVLRTITVKEQGAVCDNAWDATTTYLGGETVSHASKSWLAGWWTQGDEPGTTGEWGVWKAQ
GDSDCDGGLPPVVKPTLDISGIAPRYVLEQGSVSIEFSASVNQTMVVNASLVQGSTVFASSEVSVASSAAMTLSATDLAA
GSYEVVVSAPEQELIRRTSISLVEEDSEGGDYPAYAAGTNYQAGDVVTNAGGVYECLPWPNSGWCSGAASHYAPGTGSAW
QDAWFAR

Sequences:

>Translated_727_residues
MKSLKLNLLGASIALAMGAVSAPAMANGVDMINPQAGVVVGYWHNWCGGAGYKGGVAPCVTLTEVDPQYNVVDVSFMKVY
GAVGTIPTFKLDPEIGLTEAQFIEQIGELNRQGRSVLIALGGADAHIELRSGQEQALASEIIRLVEVYGFDGLDIDLEQA
AVTAADNQTVIPAALRIVKDYYREQGKNFLITMAPEFPYLTTGGKYVPYITALEGYYDWINPQFYNQGGDGIYIEGLGWV
AQNNDNLKQEFIYHIADALSNGTNGFTKIPHDKLVFGIPTNIDAAATGYINEPQKLYAAFEQLKAQGQPLRGVMTWSVNW
DMGQSSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIFSGLSNTRVKLGAEFDALAGVNARDMEDGDITSSIQVEGSV
DTLTLGLYALTYRVSDSDDNLTEQVRTVEVYNTKPELKGVANASVLLGSVFDALAGVSAIDAEDGDLTAQVSVEGDVDTS
SVGQYLLTYRVSDSAAQQVEVLRTITVKEQGAVCDNAWDATTTYLGGETVSHASKSWLAGWWTQGDEPGTTGEWGVWKAQ
GDSDCDGGLPPVVKPTLDISGIAPRYVLEQGSVSIEFSASVNQTMVVNASLVQGSTVFASSEVSVASSAAMTLSATDLAA
GSYEVVVSAPEQELIRRTSISLVEEDSEGGDYPAYAAGTNYQAGDVVTNAGGVYECLPWPNSGWCSGAASHYAPGTGSAW
QDAWFAR
>Mature_727_residues
MKSLKLNLLGASIALAMGAVSAPAMANGVDMINPQAGVVVGYWHNWCGGAGYKGGVAPCVTLTEVDPQYNVVDVSFMKVY
GAVGTIPTFKLDPEIGLTEAQFIEQIGELNRQGRSVLIALGGADAHIELRSGQEQALASEIIRLVEVYGFDGLDIDLEQA
AVTAADNQTVIPAALRIVKDYYREQGKNFLITMAPEFPYLTTGGKYVPYITALEGYYDWINPQFYNQGGDGIYIEGLGWV
AQNNDNLKQEFIYHIADALSNGTNGFTKIPHDKLVFGIPTNIDAAATGYINEPQKLYAAFEQLKAQGQPLRGVMTWSVNW
DMGQSSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIFSGLSNTRVKLGAEFDALAGVNARDMEDGDITSSIQVEGSV
DTLTLGLYALTYRVSDSDDNLTEQVRTVEVYNTKPELKGVANASVLLGSVFDALAGVSAIDAEDGDLTAQVSVEGDVDTS
SVGQYLLTYRVSDSAAQQVEVLRTITVKEQGAVCDNAWDATTTYLGGETVSHASKSWLAGWWTQGDEPGTTGEWGVWKAQ
GDSDCDGGLPPVVKPTLDISGIAPRYVLEQGSVSIEFSASVNQTMVVNASLVQGSTVFASSEVSVASSAAMTLSATDLAA
GSYEVVVSAPEQELIRRTSISLVEEDSEGGDYPAYAAGTNYQAGDVVTNAGGVYECLPWPNSGWCSGAASHYAPGTGSAW
QDAWFAR

Specific function: Unknown

COG id: COG3469

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 77418; Mature: 77418

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKLNLLGASIALAMGAVSAPAMANGVDMINPQAGVVVGYWHNWCGGAGYKGGVAPCV
CCCEEEEEEHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEE
TLTEVDPQYNVVDVSFMKVYGAVGTIPTFKLDPEIGLTEAQFIEQIGELNRQGRSVLIAL
EEEECCCCCCEEEEHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEE
GGADAHIELRSGQEQALASEIIRLVEVYGFDGLDIDLEQAAVTAADNQTVIPAALRIVKD
CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHEEEECCCCEEHHHHHHHHHH
YYREQGKNFLITMAPEFPYLTTGGKYVPYITALEGYYDWINPQFYNQGGDGIYIEGLGWV
HHHHCCCEEEEEECCCCCEEECCCCCCCEEEEEHHHHHCCCCEEECCCCCEEEEEEEEEE
AQNNDNLKQEFIYHIADALSNGTNGFTKIPHDKLVFGIPTNIDAAATGYINEPQKLYAAF
ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
EQLKAQGQPLRGVMTWSVNWDMGQSSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIF
HHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
SGLSNTRVKLGAEFDALAGVNARDMEDGDITSSIQVEGSVDTLTLGLYALTYRVSDSDDN
CCCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCC
LTEQVRTVEVYNTKPELKGVANASVLLGSVFDALAGVSAIDAEDGDLTAQVSVEGDVDTS
HHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCCCHH
SVGQYLLTYRVSDSAAQQVEVLRTITVKEQGAVCDNAWDATTTYLGGETVSHASKSWLAG
HHCCEEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCHHHHCCHHHHEE
WWTQGDEPGTTGEWGVWKAQGDSDCDGGLPPVVKPTLDISGIAPRYVLEQGSVSIEFSAS
ECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCEEEEEECC
VNQTMVVNASLVQGSTVFASSEVSVASSAAMTLSATDLAAGSYEVVVSAPEQELIRRTSI
CCEEEEEEEEEECCCEEEECCCCCHHCCCEEEEEEHHCCCCCEEEEEECCHHHHHHHHHH
SLVEEDSEGGDYPAYAAGTNYQAGDVVTNAGGVYECLPWPNSGWCSGAASHYAPGTGSAW
HEEEECCCCCCCCCEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
QDAWFAR
CHHHCCC
>Mature Secondary Structure
MKSLKLNLLGASIALAMGAVSAPAMANGVDMINPQAGVVVGYWHNWCGGAGYKGGVAPCV
CCCEEEEEEHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEE
TLTEVDPQYNVVDVSFMKVYGAVGTIPTFKLDPEIGLTEAQFIEQIGELNRQGRSVLIAL
EEEECCCCCCEEEEHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEE
GGADAHIELRSGQEQALASEIIRLVEVYGFDGLDIDLEQAAVTAADNQTVIPAALRIVKD
CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHEEEECCCCEEHHHHHHHHHH
YYREQGKNFLITMAPEFPYLTTGGKYVPYITALEGYYDWINPQFYNQGGDGIYIEGLGWV
HHHHCCCEEEEEECCCCCEEECCCCCCCEEEEEHHHHHCCCCEEECCCCCEEEEEEEEEE
AQNNDNLKQEFIYHIADALSNGTNGFTKIPHDKLVFGIPTNIDAAATGYINEPQKLYAAF
ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
EQLKAQGQPLRGVMTWSVNWDMGQSSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIF
HHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
SGLSNTRVKLGAEFDALAGVNARDMEDGDITSSIQVEGSVDTLTLGLYALTYRVSDSDDN
CCCCCCEEEECCCHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCC
LTEQVRTVEVYNTKPELKGVANASVLLGSVFDALAGVSAIDAEDGDLTAQVSVEGDVDTS
HHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEEEECCCCCHH
SVGQYLLTYRVSDSAAQQVEVLRTITVKEQGAVCDNAWDATTTYLGGETVSHASKSWLAG
HHCCEEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCCHHHHCCHHHHEE
WWTQGDEPGTTGEWGVWKAQGDSDCDGGLPPVVKPTLDISGIAPRYVLEQGSVSIEFSAS
ECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCEEEEEECC
VNQTMVVNASLVQGSTVFASSEVSVASSAAMTLSATDLAAGSYEVVVSAPEQELIRRTSI
CCEEEEEEEEEECCCEEEECCCCCHHCCCEEEEEEHHCCCCCEEEEEECCHHHHHHHHHH
SLVEEDSEGGDYPAYAAGTNYQAGDVVTNAGGVYECLPWPNSGWCSGAASHYAPGTGSAW
HEEEECCCCCCCCCEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
QDAWFAR
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]