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The map label for this gene is petA [H]

Identifier: 167625536

GI number: 167625536

Start: 4426717

End: 4427307

Strand: Reverse

Name: petA [H]

Synonym: Shal_3630

Alternate gene names: 167625536

Gene position: 4427307-4426717 (Counterclockwise)

Preceding gene: 167625537

Following gene: 167625535

Centisome position: 84.7

GC content: 48.9

Gene sequence:

>591_bases
ATGAGCAATGCGCCAGTCGATACCGGACGTCGCAGATTTCTGACCGTAGCCACCGCCGTAGTTGGTGGTGCTGGTGCCGC
TGCTGTAGCGGTTCCGTTTATAAAGTCATGGAATCCGAGTGCCAAAGCGAAAGCTGCAGGTGCGCCGGTAGAAGTAAATA
TTAGTAAAGTAGAGCCAGGTCAACTTATTCGAGTTGAGTGGCGTGGTAAGCCTGTATGGGTTGTTCGTCGTACGCAGGAG
ATCTTAGATGGTCTACCAACACTCGATGCTCAGCTTCGCGATCCAGACTCTGTTGAACCACAGCAGCCTGCATACGCTCA
AAACTCTGGACGTTCAATTAAGGCTGAGTACTTCATAGCCGTTGGCTTATGTACCCATCTAGGTTGTTCTCCAACTTACC
TACCAGACACGTTTGGTGAGCAAGTAGAAGGGGTTGCCTCTGGCTTCTTCTGCCCTTGTCACGGTTCTAAGTTTGATATG
GCTGGTCGTGTGTTCCAAGGTGTACCAGCACCATTAAACCTAGTTATTCCTCCACATCAATATATTGATGATAGCACCGT
AATTATTGGTGTTGATACAGGAGCTGCGTAA

Upstream 100 bases:

>100_bases
ATAATGGGCTGCTTCTCAAATTCGGATTTGAATTTCGGTTTAAATCTGCTTTGAAAAAGATAATAAAACAAAAATTCCAA
CACTCTCTGGAGACAAGTGG

Downstream 100 bases:

>100_bases
TGGTTAAGAATATTATTAACTGGATTGATGAACGCATTCCAATGACCGCGACGTACAATCGTCACGTCGGTCAATATGCG
ACACCAACCAACTTTAACTT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSNAPVDTGRRRFLTVATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPGQLIRVEWRGKPVWVVRRTQE
ILDGLPTLDAQLRDPDSVEPQQPAYAQNSGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDM
AGRVFQGVPAPLNLVIPPHQYIDDSTVIIGVDTGAA

Sequences:

>Translated_196_residues
MSNAPVDTGRRRFLTVATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPGQLIRVEWRGKPVWVVRRTQE
ILDGLPTLDAQLRDPDSVEPQQPAYAQNSGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDM
AGRVFQGVPAPLNLVIPPHQYIDDSTVIIGVDTGAA
>Mature_195_residues
SNAPVDTGRRRFLTVATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPGQLIRVEWRGKPVWVVRRTQEI
LDGLPTLDAQLRDPDSVEPQQPAYAQNSGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDMA
GRVFQGVPAPLNLVIPPHQYIDDSTVIIGVDTGAA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=180, Percent_Identity=37.2222222222222, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17540418, Length=180, Percent_Identity=35.5555555555556, Blast_Score=103, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6320811, Length=191, Percent_Identity=36.1256544502618, Blast_Score=109, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24580896, Length=161, Percent_Identity=35.4037267080745, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20756; Mature: 20625

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAPVDTGRRRFLTVATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPG
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
QLIRVEWRGKPVWVVRRTQEILDGLPTLDAQLRDPDSVEPQQPAYAQNSGRSIKAEYFIA
CEEEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
VGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQ
EEHHHHCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHCCCCCEEEEECCHH
YIDDSTVIIGVDTGAA
HCCCCEEEEEECCCCC
>Mature Secondary Structure 
SNAPVDTGRRRFLTVATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPG
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
QLIRVEWRGKPVWVVRRTQEILDGLPTLDAQLRDPDSVEPQQPAYAQNSGRSIKAEYFIA
CEEEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
VGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQ
EEHHHHCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHCCCCCEEEEECCHH
YIDDSTVIIGVDTGAA
HCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA