| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is astA [H]
Identifier: 167625515
GI number: 167625515
Start: 4403244
End: 4404263
Strand: Reverse
Name: astA [H]
Synonym: Shal_3609
Alternate gene names: 167625515
Gene position: 4404263-4403244 (Counterclockwise)
Preceding gene: 167625516
Following gene: 167625514
Centisome position: 84.26
GC content: 46.67
Gene sequence:
>1020_bases ATGTTAGTTATACGTCCAATCCGATCGACTGACTTTAAAGCGCTATACCAAATTGCGGAAGAGTCAGGGCATGGATTCAC ATCTCTACCGGTAAATGAAGATCTATTGAGGAGCAAAATTGCTCGAGTAGAAGAGTCGTTTACTAAGCAGATCGATAAAC CTTTCGATGAAGGTTATTTGATGGTGCTAGAAGATACCGAAACCGGCGAGGTTGTCGGTACTTGTGGTATAGAGGCTGCG GTAGGCATGGTTGATGCCTTTTACCACTATCGACTGGGTACTGAGGTTTACCACTCTGAGCAGATCGGTGTGCGTAATGA GGTCGAGACCTTAACCCTTTGCCACGATTACACTGGCGCTGCAGAGCTTTGCACGCTTTTCTTACGCGGCCACTACCGTA AAAATAATAATGGTCGCATGCTTTCAAGAAGTCGTTTTTTGTTTCTTGCTCAACATGCAGAGCGGTTTGGCGAAACCGTC ATTGCAGAGATGCGTGGTGAAAGCGATGCCGATGGTAACTCCCCTTTCTATGGGTGGTTGCAAGAACACTTCTTAGGTAT CGATTTTGTGCAGGCCGATTATCTTTCAGGCCTTAGCCAAAAAGCGTTCATGGCAGAGATGATGCCTAAGAATGCGGTCT ATGTATGCCTATTGCCAAAAGAAGCGCAAAAAGTGATTGGTGAAGTTCATGCTAATACCCGCCCAGCGCTTAATTTGTTG CAAGCGGAGGGCTTTAGATGCCGTGGTTATGTTGATATTTTTGATGGTGGACCTACGGTTGAATGCCATCTACATGATAT TCGCTCTGTGCGTGAAAGCCGTTTACTGACTATCACCATAGGTGCAACACCAAGTGACGCCGAAAGCTATATCGTTTCAA ATACTCAATTAGCGGATTACCGCGCTACCACTGCCAACTTAGCCGTAGTCGACGACTGTGATGACGTGATCTTAGATGCA CAAACCGCGGCAGCCCTTATGGTTGCAGATGGTGAGCAGATCCGCGTATTGCCAATGTAG
Upstream 100 bases:
>100_bases CTTTTTTGTCTTTAGGATAACTTGACCGTTTATTGAGCAGTGCTTGTCATATATTGGTAAGGCTGACGAACACGGCAAGT GATAGCGAGGAGACTCCTAG
Downstream 100 bases:
>100_bases GAATAGAAAATGACACAATTTATTGAAGGTAAGTGGGTTGCAGGTTTAGGTCACGAAGTGACATCAATTAACCCAGCCAA CCAAGAAGTGATTTGGAATA
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYLMVLEDTETGEVVGTCGIEAA VGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGAAELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETV IAEMRGESDADGNSPFYGWLQEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADYRATTANLAVVDDCDDVILDA QTAAALMVADGEQIRVLPM
Sequences:
>Translated_339_residues MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYLMVLEDTETGEVVGTCGIEAA VGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGAAELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETV IAEMRGESDADGNSPFYGWLQEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADYRATTANLAVVDDCDDVILDA QTAAALMVADGEQIRVLPM >Mature_339_residues MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYLMVLEDTETGEVVGTCGIEAA VGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGAAELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETV IAEMRGESDADGNSPFYGWLQEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADYRATTANLAVVDDCDDVILDA QTAAALMVADGEQIRVLPM
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=339, Percent_Identity=44.5427728613569, Blast_Score=298, Evalue=3e-82,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 37752; Mature: 37752
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYL CEEEECCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE MVLEDTETGEVVGTCGIEAAVGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGA EEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEEEEECCCCH AELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETVIAEMRGESDADGNSPFYGWL HHHHHHHHHHCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL HHHHCCCEEEHHHHHCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCHHHHHH QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADY HCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCEEEECCEECCE RATTANLAVVDDCDDVILDAQTAAALMVADGEQIRVLPM EECCCCEEEEECCCHHEEECCHHEEEEEECCCEEEEECC >Mature Secondary Structure MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYL CEEEECCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE MVLEDTETGEVVGTCGIEAAVGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGA EEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEEEEECCCCH AELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETVIAEMRGESDADGNSPFYGWL HHHHHHHHHHCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH QEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL HHHHCCCEEEHHHHHCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCHHHHHH QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADY HCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCEEEECCEECCE RATTANLAVVDDCDDVILDAQTAAALMVADGEQIRVLPM EECCCCEEEEECCCHHEEECCHHEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA