Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is astA [H]

Identifier: 167625515

GI number: 167625515

Start: 4403244

End: 4404263

Strand: Reverse

Name: astA [H]

Synonym: Shal_3609

Alternate gene names: 167625515

Gene position: 4404263-4403244 (Counterclockwise)

Preceding gene: 167625516

Following gene: 167625514

Centisome position: 84.26

GC content: 46.67

Gene sequence:

>1020_bases
ATGTTAGTTATACGTCCAATCCGATCGACTGACTTTAAAGCGCTATACCAAATTGCGGAAGAGTCAGGGCATGGATTCAC
ATCTCTACCGGTAAATGAAGATCTATTGAGGAGCAAAATTGCTCGAGTAGAAGAGTCGTTTACTAAGCAGATCGATAAAC
CTTTCGATGAAGGTTATTTGATGGTGCTAGAAGATACCGAAACCGGCGAGGTTGTCGGTACTTGTGGTATAGAGGCTGCG
GTAGGCATGGTTGATGCCTTTTACCACTATCGACTGGGTACTGAGGTTTACCACTCTGAGCAGATCGGTGTGCGTAATGA
GGTCGAGACCTTAACCCTTTGCCACGATTACACTGGCGCTGCAGAGCTTTGCACGCTTTTCTTACGCGGCCACTACCGTA
AAAATAATAATGGTCGCATGCTTTCAAGAAGTCGTTTTTTGTTTCTTGCTCAACATGCAGAGCGGTTTGGCGAAACCGTC
ATTGCAGAGATGCGTGGTGAAAGCGATGCCGATGGTAACTCCCCTTTCTATGGGTGGTTGCAAGAACACTTCTTAGGTAT
CGATTTTGTGCAGGCCGATTATCTTTCAGGCCTTAGCCAAAAAGCGTTCATGGCAGAGATGATGCCTAAGAATGCGGTCT
ATGTATGCCTATTGCCAAAAGAAGCGCAAAAAGTGATTGGTGAAGTTCATGCTAATACCCGCCCAGCGCTTAATTTGTTG
CAAGCGGAGGGCTTTAGATGCCGTGGTTATGTTGATATTTTTGATGGTGGACCTACGGTTGAATGCCATCTACATGATAT
TCGCTCTGTGCGTGAAAGCCGTTTACTGACTATCACCATAGGTGCAACACCAAGTGACGCCGAAAGCTATATCGTTTCAA
ATACTCAATTAGCGGATTACCGCGCTACCACTGCCAACTTAGCCGTAGTCGACGACTGTGATGACGTGATCTTAGATGCA
CAAACCGCGGCAGCCCTTATGGTTGCAGATGGTGAGCAGATCCGCGTATTGCCAATGTAG

Upstream 100 bases:

>100_bases
CTTTTTTGTCTTTAGGATAACTTGACCGTTTATTGAGCAGTGCTTGTCATATATTGGTAAGGCTGACGAACACGGCAAGT
GATAGCGAGGAGACTCCTAG

Downstream 100 bases:

>100_bases
GAATAGAAAATGACACAATTTATTGAAGGTAAGTGGGTTGCAGGTTTAGGTCACGAAGTGACATCAATTAACCCAGCCAA
CCAAGAAGTGATTTGGAATA

Product: arginine N-succinyltransferase

Products: NA

Alternate protein names: AST; AOST [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYLMVLEDTETGEVVGTCGIEAA
VGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGAAELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETV
IAEMRGESDADGNSPFYGWLQEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL
QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADYRATTANLAVVDDCDDVILDA
QTAAALMVADGEQIRVLPM

Sequences:

>Translated_339_residues
MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYLMVLEDTETGEVVGTCGIEAA
VGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGAAELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETV
IAEMRGESDADGNSPFYGWLQEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL
QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADYRATTANLAVVDDCDDVILDA
QTAAALMVADGEQIRVLPM
>Mature_339_residues
MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYLMVLEDTETGEVVGTCGIEAA
VGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGAAELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETV
IAEMRGESDADGNSPFYGWLQEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL
QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADYRATTANLAVVDDCDDVILDA
QTAAALMVADGEQIRVLPM

Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]

COG id: COG3138

COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginine N-succinyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1788043, Length=339, Percent_Identity=44.5427728613569, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR007041
- InterPro:   IPR017650 [H]

Pfam domain/function: PF04958 AstA [H]

EC number: =2.3.1.109 [H]

Molecular weight: Translated: 37752; Mature: 37752

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYL
CEEEECCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
MVLEDTETGEVVGTCGIEAAVGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGA
EEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEEEEECCCCH
AELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETVIAEMRGESDADGNSPFYGWL
HHHHHHHHHHCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
QEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL
HHHHCCCEEEHHHHHCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCHHHHHH
QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADY
HCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCEEEECCEECCE
RATTANLAVVDDCDDVILDAQTAAALMVADGEQIRVLPM
EECCCCEEEEECCCHHEEECCHHEEEEEECCCEEEEECC
>Mature Secondary Structure
MLVIRPIRSTDFKALYQIAEESGHGFTSLPVNEDLLRSKIARVEESFTKQIDKPFDEGYL
CEEEECCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
MVLEDTETGEVVGTCGIEAAVGMVDAFYHYRLGTEVYHSEQIGVRNEVETLTLCHDYTGA
EEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCEEEEEEECCCCH
AELCTLFLRGHYRKNNNGRMLSRSRFLFLAQHAERFGETVIAEMRGESDADGNSPFYGWL
HHHHHHHHHHCEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
QEHFLGIDFVQADYLSGLSQKAFMAEMMPKNAVYVCLLPKEAQKVIGEVHANTRPALNLL
HHHHCCCEEEHHHHHCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCHHHHHH
QAEGFRCRGYVDIFDGGPTVECHLHDIRSVRESRLLTITIGATPSDAESYIVSNTQLADY
HCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCEEEECCEECCE
RATTANLAVVDDCDDVILDAQTAAALMVADGEQIRVLPM
EECCCCEEEEECCCHHEEECCHHEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA