Click here to switch to the map view.

The map label for this gene is 167625461

Identifier: 167625461

GI number: 167625461

Start: 4333215

End: 4333694

Strand: Reverse

Name: 167625461

Synonym: Shal_3553

Alternate gene names: NA

Gene position: 4333694-4333215 (Counterclockwise)

Preceding gene: 167625467

Following gene: 167625460

Centisome position: 82.91

GC content: 41.25

Gene sequence:

>480_bases
ATGCCACATTCTAAAAATAAACAGAGTTATAAAAGTATGAATAAATATATTAGTTCAATGATCGCAGGATTTGTCGCCAC
CATCGTATTGTCACTTTTGATGCTTATGAAGCAAGCAATGGGGTTAATGCCTGAGTTAAACCCAATCATGATGCTTAGTA
ATATGGCGCATATGAAAATGGGTCTGCCAGAGTCTATGGTGGTTGGCTGGATGGCTCATTTTATGATTGGCACCTTTGTC
TGGGGGCTTACATTTTCGTTACTGTTTAAAGTATTACCAGGTAGTTGTGCCATTAGTAAAGGCGTCGCGTTTTCAGTATT
GGCGTGGTTTCTTATGATGATTCTGCCAATGCCTATGTCAGGTGCTGGCCTATTTGGAGTTAATTTGGGAATGATGGCAC
CAGTGATGGCACTTGGAATGCACTTAGTCTGGGGTGTGGTGTTGGGATACGTATATGGACGTTTAGTCAGTAAAGGCTAA

Upstream 100 bases:

>100_bases
GAATCCATTCTAAAACTACTTATTTGAAGTTTATTTTTAATCTTGCGAACCGTTTTCGTGCTTCAGCGCCTCTTAATAAA
TATGTCGTGGTGTTGGAGCA

Downstream 100 bases:

>100_bases
TAAGCGATATTAAACTAAAATCAGTAATGTCGGACAGTGATAATACTTAAGCTGTAATGCAGCACTGATGAATGACATTA
TATTTAATTAATATATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPHSKNKQSYKSMNKYISSMIAGFVATIVLSLLMLMKQAMGLMPELNPIMMLSNMAHMKMGLPESMVVGWMAHFMIGTFV
WGLTFSLLFKVLPGSCAISKGVAFSVLAWFLMMILPMPMSGAGLFGVNLGMMAPVMALGMHLVWGVVLGYVYGRLVSKG

Sequences:

>Translated_159_residues
MPHSKNKQSYKSMNKYISSMIAGFVATIVLSLLMLMKQAMGLMPELNPIMMLSNMAHMKMGLPESMVVGWMAHFMIGTFV
WGLTFSLLFKVLPGSCAISKGVAFSVLAWFLMMILPMPMSGAGLFGVNLGMMAPVMALGMHLVWGVVLGYVYGRLVSKG
>Mature_158_residues
PHSKNKQSYKSMNKYISSMIAGFVATIVLSLLMLMKQAMGLMPELNPIMMLSNMAHMKMGLPESMVVGWMAHFMIGTFVW
GLTFSLLFKVLPGSCAISKGVAFSVLAWFLMMILPMPMSGAGLFGVNLGMMAPVMALGMHLVWGVVLGYVYGRLVSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17364; Mature: 17233

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
14.5 %Met     (Translated Protein)
15.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
13.9 %Met     (Mature Protein)
14.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHSKNKQSYKSMNKYISSMIAGFVATIVLSLLMLMKQAMGLMPELNPIMMLSNMAHMKM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GLPESMVVGWMAHFMIGTFVWGLTFSLLFKVLPGSCAISKGVAFSVLAWFLMMILPMPMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GAGLFGVNLGMMAPVMALGMHLVWGVVLGYVYGRLVSKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PHSKNKQSYKSMNKYISSMIAGFVATIVLSLLMLMKQAMGLMPELNPIMMLSNMAHMKM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GLPESMVVGWMAHFMIGTFVWGLTFSLLFKVLPGSCAISKGVAFSVLAWFLMMILPMPMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
GAGLFGVNLGMMAPVMALGMHLVWGVVLGYVYGRLVSKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA