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The map label for this gene is 167625456

Identifier: 167625456

GI number: 167625456

Start: 4328206

End: 4328682

Strand: Reverse

Name: 167625456

Synonym: Shal_3548

Alternate gene names: NA

Gene position: 4328682-4328206 (Counterclockwise)

Preceding gene: 167625457

Following gene: 167625451

Centisome position: 82.82

GC content: 44.03

Gene sequence:

>477_bases
ATGGCAAAACGTTCAAAAATCCAAACTAAGCAAACCGTACAGCAGATCCTTGATGAGGCGATGAAGCAGATTTTGGATCT
GGGTTATGATGCCATGTCTTATTCAACGCTGTCTGAGGCAACAGGCATTAGCCGCACAGGGATAAGCCATCATTTCCCCC
ATAAAATCGACTTTCTGAAACAGCTAGACTCACGCATTGCTAACCTGTTTATCGAGCGTTTAGATTTCTCCTGTATTCAG
TCGTTGCAAACATCTTGGAAAAACGCCCTAAAAATACCCTATTTTAGGGCGATAATAAGATTGTTCTTCTCTATCTGTGG
TTCTAATCAAGTGGATGTAGAGCGTTATAAAGCCATTAGCTTAGCCAGTGACAAAGCGCTGAGTGAGCTCGGCGAGCAGG
GACGTTTATTGGTGAATGCTCTAGTTGGACAGAGCGCATTAGCGCTATTTGGCCAGCCCAATGAGGTTAATCGCTAA

Upstream 100 bases:

>100_bases
AGTGAGAACTGAACGACAGCTGAACAGAACTTATTGATTTAGGAATTCATGAAATGCTTTTGCTAGAGTAAGCCCATGTC
GATTTCAGTGAAGTGCTCTT

Downstream 100 bases:

>100_bases
TAATTCGTCACTATCAAGGAAAGGCCGCAATAGCAGCAATGCCGGTAAGTTAGGCTCAAACTTGATTAATAAACAAAAAC
TAAGAACCCTGCATAAGCAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxT; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; LuxT Regulator; Regulatory Protein TetR; LuxT Transcriptional Regulator

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAKRSKIQTKQTVQQILDEAMKQILDLGYDAMSYSTLSEATGISRTGISHHFPHKIDFLKQLDSRIANLFIERLDFSCIQ
SLQTSWKNALKIPYFRAIIRLFFSICGSNQVDVERYKAISLASDKALSELGEQGRLLVNALVGQSALALFGQPNEVNR

Sequences:

>Translated_158_residues
MAKRSKIQTKQTVQQILDEAMKQILDLGYDAMSYSTLSEATGISRTGISHHFPHKIDFLKQLDSRIANLFIERLDFSCIQ
SLQTSWKNALKIPYFRAIIRLFFSICGSNQVDVERYKAISLASDKALSELGEQGRLLVNALVGQSALALFGQPNEVNR
>Mature_157_residues
AKRSKIQTKQTVQQILDEAMKQILDLGYDAMSYSTLSEATGISRTGISHHFPHKIDFLKQLDSRIANLFIERLDFSCIQS
LQTSWKNALKIPYFRAIIRLFFSICGSNQVDVERYKAISLASDKALSELGEQGRLLVNALVGQSALALFGQPNEVNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17781; Mature: 17650

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSKIQTKQTVQQILDEAMKQILDLGYDAMSYSTLSEATGISRTGISHHFPHKIDFLK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
QLDSRIANLFIERLDFSCIQSLQTSWKNALKIPYFRAIIRLFFSICGSNQVDVERYKAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LASDKALSELGEQGRLLVNALVGQSALALFGQPNEVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKRSKIQTKQTVQQILDEAMKQILDLGYDAMSYSTLSEATGISRTGISHHFPHKIDFLK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
QLDSRIANLFIERLDFSCIQSLQTSWKNALKIPYFRAIIRLFFSICGSNQVDVERYKAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LASDKALSELGEQGRLLVNALVGQSALALFGQPNEVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA