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The map label for this gene is pqiA [H]

Identifier: 167625261

GI number: 167625261

Start: 4091265

End: 4092470

Strand: Reverse

Name: pqiA [H]

Synonym: Shal_3350

Alternate gene names: 167625261

Gene position: 4092470-4091265 (Counterclockwise)

Preceding gene: 167625264

Following gene: 167625260

Centisome position: 78.3

GC content: 38.56

Gene sequence:

>1206_bases
ATGGTAATTAATAATCACGAAAACAATAGTTTAGATAAAGCTGATGTTTGTAATGAGTGTGACCTTACCTTATTGATCCC
CAAGTTAGCGGTAAACCAAAAAGCGCTTTGTCCTCGTTGTGGCTACCTTTTAACGGCTAGACGTAGTAACTGCTTGGATC
GTATTCTTGCGTTTGCCATTTCAGCGTTAATTTTCTTGATCCTATCATTTCAATTTGAGTTTATTTCTTTTGAATATAAT
GGCTTAGGAGATAGCATTAAGCTCTTAGATAGCGTGAGAATTCTTATTGATAATGGTTATGCTTGGCTTGCCATTATCGA
AGTGGCTAGCGTATTTGTTATCCCCGGTTTCATATTAATCTCTGTTATCTATTTAGTGTTTTTTCTCAGGCAAGGTCGCT
ATCCACCTAAAGGGCTAGGCCTCACAAGTGTGATATTTAAATTGATCCCTTGGAATATGGTAGAGATTTTTTTAATAGGA
ACCTTAGTAAGCTTTGTAAAGATAATTTCGATAGCAGAAATTGGCTTGGGTACTTCCTATTTTTCATTTATTTTATTTTC
AATTTCAATGACTGCCGCGTTATTACACTTGGATAAAAGAGCATTTTATCAAGCGTTAACAGTGAGGCGTACTGAACAGC
AGCGAGTCCGCGTTCCAGTGTCTGAGCCTGCCGAGCCAAAACTCATACCTCAAGTGACAAGCAGTGATAAACGTCGAGCT
AACAGCCTATCAATCCAAAAAACTTGGGCATTAATTATTACTGCAATTCTCCTTTACATTCCGGCTAATATTTTGCCGAT
AATGAATACTCAATTTTTAGGACAGAATGAACCTAATACAATCATTGGCGGGGTATTATTACTCTGGCAAGAAAAGTCAT
ATCCTATTGCTATGGTAGTATTTATTGCCAGCATTATGGTACCGATTACTAAAATAGCTACCCTTATCTGGTTAAATTAC
AGCGTACAGATCCACTCGGGTCAATTATCGCATCAACGCATACTTTTGTACCGCGCTGCAGAGTTTATTGGTCGCTGGTC
CATGGTGGATATATTTGTGGTGATTACACTCACAAGCTTGGTTCAGCTTGGTAATACCATGAGCATAATACCTGGCCCTG
CTAGTTTGGCTTTCTCGGCGGTCGTCATCATAACTATGTTGGCTGCAATGAGCTTTGAGCCGAAATTAATCTATAACGAG
TATTAA

Upstream 100 bases:

>100_bases
ACTTACTGACTTGATTATTATTTTGCTGAGTTGTAAACTTTTATCTTACATTTGACTTGCTATGCAGGTTAAAACACCTT
AATTAGGTTTGATTAACGAT

Downstream 100 bases:

>100_bases
AATTTATGAAAACACAACAGCCCCTTGATGCAGAGATTAAAACAGTGAAAACAATCTCTACTATCTGGTTTGTGCCCATA
GTTGCCCTATTGATTGGTGG

Product: PqiA family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MVINNHENNSLDKADVCNECDLTLLIPKLAVNQKALCPRCGYLLTARRSNCLDRILAFAISALIFLILSFQFEFISFEYN
GLGDSIKLLDSVRILIDNGYAWLAIIEVASVFVIPGFILISVIYLVFFLRQGRYPPKGLGLTSVIFKLIPWNMVEIFLIG
TLVSFVKIISIAEIGLGTSYFSFILFSISMTAALLHLDKRAFYQALTVRRTEQQRVRVPVSEPAEPKLIPQVTSSDKRRA
NSLSIQKTWALIITAILLYIPANILPIMNTQFLGQNEPNTIIGGVLLLWQEKSYPIAMVVFIASIMVPITKIATLIWLNY
SVQIHSGQLSHQRILLYRAAEFIGRWSMVDIFVVITLTSLVQLGNTMSIIPGPASLAFSAVVIITMLAAMSFEPKLIYNE
Y

Sequences:

>Translated_401_residues
MVINNHENNSLDKADVCNECDLTLLIPKLAVNQKALCPRCGYLLTARRSNCLDRILAFAISALIFLILSFQFEFISFEYN
GLGDSIKLLDSVRILIDNGYAWLAIIEVASVFVIPGFILISVIYLVFFLRQGRYPPKGLGLTSVIFKLIPWNMVEIFLIG
TLVSFVKIISIAEIGLGTSYFSFILFSISMTAALLHLDKRAFYQALTVRRTEQQRVRVPVSEPAEPKLIPQVTSSDKRRA
NSLSIQKTWALIITAILLYIPANILPIMNTQFLGQNEPNTIIGGVLLLWQEKSYPIAMVVFIASIMVPITKIATLIWLNY
SVQIHSGQLSHQRILLYRAAEFIGRWSMVDIFVVITLTSLVQLGNTMSIIPGPASLAFSAVVIITMLAAMSFEPKLIYNE
Y
>Mature_401_residues
MVINNHENNSLDKADVCNECDLTLLIPKLAVNQKALCPRCGYLLTARRSNCLDRILAFAISALIFLILSFQFEFISFEYN
GLGDSIKLLDSVRILIDNGYAWLAIIEVASVFVIPGFILISVIYLVFFLRQGRYPPKGLGLTSVIFKLIPWNMVEIFLIG
TLVSFVKIISIAEIGLGTSYFSFILFSISMTAALLHLDKRAFYQALTVRRTEQQRVRVPVSEPAEPKLIPQVTSSDKRRA
NSLSIQKTWALIITAILLYIPANILPIMNTQFLGQNEPNTIIGGVLLLWQEKSYPIAMVVFIASIMVPITKIATLIWLNY
SVQIHSGQLSHQRILLYRAAEFIGRWSMVDIFVVITLTSLVQLGNTMSIIPGPASLAFSAVVIITMLAAMSFEPKLIYNE
Y

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=411, Percent_Identity=37.956204379562, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1788137, Length=407, Percent_Identity=29.2383292383292, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 44903; Mature: 44903

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINNHENNSLDKADVCNECDLTLLIPKLAVNQKALCPRCGYLLTARRSNCLDRILAFAI
CEECCCCCCCCCHHHCCCCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SALIFLILSFQFEFISFEYNGLGDSIKLLDSVRILIDNGYAWLAIIEVASVFVIPGFILI
HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH
SVIYLVFFLRQGRYPPKGLGLTSVIFKLIPWNMVEIFLIGTLVSFVKIISIAEIGLGTSY
HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FSFILFSISMTAALLHLDKRAFYQALTVRRTEQQRVRVPVSEPAEPKLIPQVTSSDKRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCHHHHH
NSLSIQKTWALIITAILLYIPANILPIMNTQFLGQNEPNTIIGGVLLLWQEKSYPIAMVV
HCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCHHEEHEEEEEECCCCCHHHHH
FIASIMVPITKIATLIWLNYSVQIHSGQLSHQRILLYRAAEFIGRWSMVDIFVVITLTSL
HHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VQLGNTMSIIPGPASLAFSAVVIITMLAAMSFEPKLIYNEY
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure
MVINNHENNSLDKADVCNECDLTLLIPKLAVNQKALCPRCGYLLTARRSNCLDRILAFAI
CEECCCCCCCCCHHHCCCCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SALIFLILSFQFEFISFEYNGLGDSIKLLDSVRILIDNGYAWLAIIEVASVFVIPGFILI
HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH
SVIYLVFFLRQGRYPPKGLGLTSVIFKLIPWNMVEIFLIGTLVSFVKIISIAEIGLGTSY
HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FSFILFSISMTAALLHLDKRAFYQALTVRRTEQQRVRVPVSEPAEPKLIPQVTSSDKRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCHHHHH
NSLSIQKTWALIITAILLYIPANILPIMNTQFLGQNEPNTIIGGVLLLWQEKSYPIAMVV
HCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCCCCCCHHEEHEEEEEECCCCCHHHHH
FIASIMVPITKIATLIWLNYSVQIHSGQLSHQRILLYRAAEFIGRWSMVDIFVVITLTSL
HHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VQLGNTMSIIPGPASLAFSAVVIITMLAAMSFEPKLIYNEY
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]