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The map label for this gene is adrA [H]

Identifier: 167625210

GI number: 167625210

Start: 4021430

End: 4022494

Strand: Reverse

Name: adrA [H]

Synonym: Shal_3298

Alternate gene names: 167625210

Gene position: 4022494-4021430 (Counterclockwise)

Preceding gene: 167625212

Following gene: 167625209

Centisome position: 76.96

GC content: 42.16

Gene sequence:

>1065_bases
ATGGATAGATTCAGCTTTTTGGGTAACCCTCAGGACGAAGGCCTGTTCGATATTTACAGTCGTCAGCGAGTACTGACATT
TATTCTGCTTGTGACACTGATGACTTTTCTACCACTAAGTATCAAGAACTTTGTGATTGGAGAGACCTTGCTCGGTTTTT
GTTTACTTGCCTTTGAGTTAAGTCTGGTCATCGAAGTCTTTGGTATATTGCGATTAAATCGCAATATTTTGGGTTATAGG
CCCCCACTTTTTTTGCTCGCTATCTCGATGGTGTTGAGCATTCATGTCTTTGGTACGCTGGCAACATACTGGGTGTTTCC
TGTTGTCACAAGCATCGTACTATTAGTCCCTAAAAAAATGGCCATGTTGGCTAATGGGGGAATTATCTTAACGAGTGCTG
TAGCGGCACTTCCGCATCAAGAACCCACTGTGACACTGCGATTTATTCTTGCGCTGCTTTTCTGTGTATCAATTGCTCAT
TATGTAATTGAAACGGTGAGAAAGCTGCAGGCCAATTTAAGTTATCTGTCAACGCGAGACTCATTAACTGGCGCACTCAA
CCGTCATCAACTGGACGTATCTTTAATTACGGCGAGTGAAAAAGCTAAGATGGAACAAGCCACTTGTATTGCGGCAATAG
ATATTGATTATTTCAAGGATGTAAACGATGTACATGGCCACGATGTGGGCGACCAAGTCATTAAAACAGTGGTTAAGCTA
ATTAACTGCCATTGCAGAAAGGCTGACTTACTATTTCGTTTAGGTGGTGATGAGTTCCTACTCTTATTTGATAATACCAA
AGCTGAAAGCGCGCTGAAGATTATGCGAACTATTGGCCAGGAAGTGGCTAAAGGCATTGTTGAGACATGTCCTGAAGTCG
ACAGTGTAACACTCAGCACTGGCATCGCTGAGTCTATAGTGGGTGAAGAACTTGAACTTTGGGTAAAGCGTGCAGACTTA
GCGTTATACGAGGCAAAGCATGCGGGGAGAAATCAGGTTAAAGTGAATGACGCCAATCATTTTTATAGTGAAAAAGTCGT
AGATTTAAAAACCTCTTGTCATTAA

Upstream 100 bases:

>100_bases
GTTTTTAGCGTTAAAGCGATAAGCTTTCTATTGGATGATTAAAATAAATTATTCTGTGTTGCTCATCCACATATAAGGGT
ATGACTAATAGAGGGGCACT

Downstream 100 bases:

>100_bases
ATTGAGGACTGATTGAGTGATGTCTTAAATCAGAGCTCCATTTAGTGAGGTCATAAATAGTATGGCAGTGCTCTCTGTGA
GTAATTGGCCACTTCTTACA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDRFSFLGNPQDEGLFDIYSRQRVLTFILLVTLMTFLPLSIKNFVIGETLLGFCLLAFELSLVIEVFGILRLNRNILGYR
PPLFLLAISMVLSIHVFGTLATYWVFPVVTSIVLLVPKKMAMLANGGIILTSAVAALPHQEPTVTLRFILALLFCVSIAH
YVIETVRKLQANLSYLSTRDSLTGALNRHQLDVSLITASEKAKMEQATCIAAIDIDYFKDVNDVHGHDVGDQVIKTVVKL
INCHCRKADLLFRLGGDEFLLLFDNTKAESALKIMRTIGQEVAKGIVETCPEVDSVTLSTGIAESIVGEELELWVKRADL
ALYEAKHAGRNQVKVNDANHFYSEKVVDLKTSCH

Sequences:

>Translated_354_residues
MDRFSFLGNPQDEGLFDIYSRQRVLTFILLVTLMTFLPLSIKNFVIGETLLGFCLLAFELSLVIEVFGILRLNRNILGYR
PPLFLLAISMVLSIHVFGTLATYWVFPVVTSIVLLVPKKMAMLANGGIILTSAVAALPHQEPTVTLRFILALLFCVSIAH
YVIETVRKLQANLSYLSTRDSLTGALNRHQLDVSLITASEKAKMEQATCIAAIDIDYFKDVNDVHGHDVGDQVIKTVVKL
INCHCRKADLLFRLGGDEFLLLFDNTKAESALKIMRTIGQEVAKGIVETCPEVDSVTLSTGIAESIVGEELELWVKRADL
ALYEAKHAGRNQVKVNDANHFYSEKVVDLKTSCH
>Mature_354_residues
MDRFSFLGNPQDEGLFDIYSRQRVLTFILLVTLMTFLPLSIKNFVIGETLLGFCLLAFELSLVIEVFGILRLNRNILGYR
PPLFLLAISMVLSIHVFGTLATYWVFPVVTSIVLLVPKKMAMLANGGIILTSAVAALPHQEPTVTLRFILALLFCVSIAH
YVIETVRKLQANLSYLSTRDSLTGALNRHQLDVSLITASEKAKMEQATCIAAIDIDYFKDVNDVHGHDVGDQVIKTVVKL
INCHCRKADLLFRLGGDEFLLLFDNTKAESALKIMRTIGQEVAKGIVETCPEVDSVTLSTGIAESIVGEELELWVKRADL
ALYEAKHAGRNQVKVNDANHFYSEKVVDLKTSCH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=192, Percent_Identity=34.8958333333333, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87081881, Length=187, Percent_Identity=35.8288770053476, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1787262, Length=173, Percent_Identity=39.8843930635838, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI145693134, Length=128, Percent_Identity=33.59375, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788381, Length=177, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787816, Length=160, Percent_Identity=31.25, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787541, Length=172, Percent_Identity=33.7209302325581, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787056, Length=157, Percent_Identity=32.484076433121, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI87082007, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788085, Length=185, Percent_Identity=32.4324324324324, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87081974, Length=181, Percent_Identity=28.7292817679558, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87081977, Length=196, Percent_Identity=30.6122448979592, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787802, Length=209, Percent_Identity=25.3588516746411, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 39356; Mature: 39356

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFSFLGNPQDEGLFDIYSRQRVLTFILLVTLMTFLPLSIKNFVIGETLLGFCLLAFEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVIEVFGILRLNRNILGYRPPLFLLAISMVLSIHVFGTLATYWVFPVVTSIVLLVPKKM
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLANGGIILTSAVAALPHQEPTVTLRFILALLFCVSIAHYVIETVRKLQANLSYLSTRD
HHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTGALNRHQLDVSLITASEKAKMEQATCIAAIDIDYFKDVNDVHGHDVGDQVIKTVVKL
HHHHHHHHHEEEEEEEECCHHHHHHHHHEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHH
INCHCRKADLLFRLGGDEFLLLFDNTKAESALKIMRTIGQEVAKGIVETCPEVDSVTLST
HHCCCCCHHEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
GIAESIVGEELELWVKRADLALYEAKHAGRNQVKVNDANHFYSEKVVDLKTSCH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRFSFLGNPQDEGLFDIYSRQRVLTFILLVTLMTFLPLSIKNFVIGETLLGFCLLAFEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVIEVFGILRLNRNILGYRPPLFLLAISMVLSIHVFGTLATYWVFPVVTSIVLLVPKKM
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLANGGIILTSAVAALPHQEPTVTLRFILALLFCVSIAHYVIETVRKLQANLSYLSTRD
HHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTGALNRHQLDVSLITASEKAKMEQATCIAAIDIDYFKDVNDVHGHDVGDQVIKTVVKL
HHHHHHHHHEEEEEEEECCHHHHHHHHHEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHH
INCHCRKADLLFRLGGDEFLLLFDNTKAESALKIMRTIGQEVAKGIVETCPEVDSVTLST
HHCCCCCHHEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
GIAESIVGEELELWVKRADLALYEAKHAGRNQVKVNDANHFYSEKVVDLKTSCH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]