| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625086
Identifier: 167625086
GI number: 167625086
Start: 3879332
End: 3879430
Strand: Reverse
Name: 167625086
Synonym: Shal_3174
Alternate gene names: NA
Gene position: 3879430-3879332 (Counterclockwise)
Preceding gene: 167625088
Following gene: 167625085
Centisome position: 74.22
GC content: 38.38
Gene sequence:
>99_bases ATGTCTTATACAGGACAAACTACGATTTACTGGCAAAACACTTGGTTTAATACTGATGTTTTGCGTGGCGGTTTATACGC CATGACTTTTAAGGGCTAA
Upstream 100 bases:
>100_bases AAGGAATCGAGCGACAAGTTGACTCATGAAATTAGTTTGGCTCAACCCCATTTGCTAATAATTTGAGATTCTATTTACAA CTTTGTTAGGAGTACTGACT
Downstream 100 bases:
>100_bases CCCTCCTTTAAAGTAGTTTCATCATCCATCAACCTTATAACACCCTTTGGGTGTGTTTAGACTCAAGTTGTATATTGACA CTGTCGATATGCCATTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 31
Protein sequence:
>32_residues MSYTGQTTIYWQNTWFNTDVLRGGLYAMTFKG
Sequences:
>Translated_32_residues MSYTGQTTIYWQNTWFNTDVLRGGLYAMTFKG >Mature_31_residues SYTGQTTIYWQNTWFNTDVLRGGLYAMTFKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3752; Mature: 3621
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTGQTTIYWQNTWFNTDVLRGGLYAMTFKG CCCCCCEEEEECCCCCCCHHCCCCEEEEEECC >Mature Secondary Structure SYTGQTTIYWQNTWFNTDVLRGGLYAMTFKG CCCCCEEEEECCCCCCCHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA