| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is proA
Identifier: 167625081
GI number: 167625081
Start: 3870319
End: 3871587
Strand: Reverse
Name: proA
Synonym: Shal_3169
Alternate gene names: 167625081
Gene position: 3871587-3870319 (Counterclockwise)
Preceding gene: 167625082
Following gene: 167625079
Centisome position: 74.07
GC content: 47.52
Gene sequence:
>1269_bases ATGAATAACGACGAATATTTAACGGCTTTAGGCCAAAATGCAAAGCAGGCGAGCTATGCCTTGGCCACGCTTTCGGGTCA ACAGAAGTCAGCGCTATTACGCTGTATTGCCGATAAGCTTACGGCAGCTAAAGCTGACATAGTGAGTGCTAACCAACAAG ATGTTGCAGATGCAAAAGCGAACGGCTTATCTGATGCGATGATCGATCGCTTGTTACTCGATGAAACAAGATTGATGGGC GTGATTAGCGACATTGATAACGTGATTGGTCTGACCGATCCTGTTGGTAGCGAAATCGATAGTCGCCTGTTAGATAATGG CTTGCGCTTATCTCGCAGACGTGTGCCACTCGGGGTTATCGGCGTTATTTACGAAGCTCGCCCAAATGTCACCGTCGATA TCGCAGTATTGGCCCTTAAAACTGGTAATGCAGTTATTCTGCGTGGCGGCAAAGAGACGCTAGCGTCGAACAAAGCCTTA TGCACAGTGATCCGTAGTGCCATGGTATCGCAAGGCTTATCAGAAGATTGCGTACAGCTTATCGATAACCCTGATAGAAG CTTGGTATCAGGGCTATTAAAGCTCGATAAGTATGTCGATATGATAGTGCCGCGTGGCGGGCAAAACTTGCAGCGTCTGT GCGCCGAGCAAGCCACTATTCCAGTGATCTTGGGCGGTATTGGTATTTGCCATATCTACGTTGATGCTGAGGCTAACCTC GAAAAAGCGGTTTCAGTGATTGAAAATGCCAAAGTACAACGACCGACAGTTTGTAATGCGCTCGATACCGTGCTTATTCA TCAAAGCCATGCGAAGCAGTTTATCCCTGTATTAGCTAAGCACCTTAGTGGTTTAGGGGTTAATTTTTATGGCTGCGATC AGACACAAGCTATCTTAACAGCAGAAGGTCTAGATGTTTCTGCGGCAACCGATGAGAGCTTCGCAACAGAGTGGTTGTCA CTGACTCTAGGCATTAGAGTTGTTGCTGACCTTGATGGCGCGGTTGAACATATCCGTCAATTCTCAAGTGGCCACTCAGA GTCGATTTTGACCGATAACATTCATACCGCGAGCGACTTTATGAACGCTATCGACTCGGCTGCCGTCTACGTTAATGCCA GTACCCGCTTCACCGATGGCGGTGAGTTTGGCTTAGGCGCAGAAGTTGCAGTAAGTACGCAAAAATTGCATGCTCGTGGA CCTATGGGTCTAGAAGCGCTAACAACCTATAAATGGTTAGCGTGGGGCGATTATACGATTCGTGGTTAA
Upstream 100 bases:
>100_bases ATGTCAGTAAGATTGCTGGTAAGCACTCTGATAACATCGAAGAGATACTAGGCTACGATTATGGTGATGCAGTAGTTCAC CGCAACGACATGGTGGTGTT
Downstream 100 bases:
>100_bases ACAGGGTTTACTTGATCTGTTTTAAGTCCACATAAAAAGCCGCATTGAGCGGCTTTTTTTATGACATATTTCCGGGGAGG AATGCCGTTAAGTGGTTAAG
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNNDEYLTALGQNAKQASYALATLSGQQKSALLRCIADKLTAAKADIVSANQQDVADAKANGLSDAMIDRLLLDETRLMG VISDIDNVIGLTDPVGSEIDSRLLDNGLRLSRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLASNKAL CTVIRSAMVSQGLSEDCVQLIDNPDRSLVSGLLKLDKYVDMIVPRGGQNLQRLCAEQATIPVILGGIGICHIYVDAEANL EKAVSVIENAKVQRPTVCNALDTVLIHQSHAKQFIPVLAKHLSGLGVNFYGCDQTQAILTAEGLDVSAATDESFATEWLS LTLGIRVVADLDGAVEHIRQFSSGHSESILTDNIHTASDFMNAIDSAAVYVNASTRFTDGGEFGLGAEVAVSTQKLHARG PMGLEALTTYKWLAWGDYTIRG
Sequences:
>Translated_422_residues MNNDEYLTALGQNAKQASYALATLSGQQKSALLRCIADKLTAAKADIVSANQQDVADAKANGLSDAMIDRLLLDETRLMG VISDIDNVIGLTDPVGSEIDSRLLDNGLRLSRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLASNKAL CTVIRSAMVSQGLSEDCVQLIDNPDRSLVSGLLKLDKYVDMIVPRGGQNLQRLCAEQATIPVILGGIGICHIYVDAEANL EKAVSVIENAKVQRPTVCNALDTVLIHQSHAKQFIPVLAKHLSGLGVNFYGCDQTQAILTAEGLDVSAATDESFATEWLS LTLGIRVVADLDGAVEHIRQFSSGHSESILTDNIHTASDFMNAIDSAAVYVNASTRFTDGGEFGLGAEVAVSTQKLHARG PMGLEALTTYKWLAWGDYTIRG >Mature_422_residues MNNDEYLTALGQNAKQASYALATLSGQQKSALLRCIADKLTAAKADIVSANQQDVADAKANGLSDAMIDRLLLDETRLMG VISDIDNVIGLTDPVGSEIDSRLLDNGLRLSRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLASNKAL CTVIRSAMVSQGLSEDCVQLIDNPDRSLVSGLLKLDKYVDMIVPRGGQNLQRLCAEQATIPVILGGIGICHIYVDAEANL EKAVSVIENAKVQRPTVCNALDTVLIHQSHAKQFIPVLAKHLSGLGVNFYGCDQTQAILTAEGLDVSAATDESFATEWLS LTLGIRVVADLDGAVEHIRQFSSGHSESILTDNIHTASDFMNAIDSAAVYVNASTRFTDGGEFGLGAEVAVSTQKLHARG PMGLEALTTYKWLAWGDYTIRG
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family
Homologues:
Organism=Homo sapiens, GI62912457, Length=408, Percent_Identity=36.7647058823529, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI21361368, Length=408, Percent_Identity=36.7647058823529, Blast_Score=254, Evalue=8e-68, Organism=Escherichia coli, GI1786438, Length=415, Percent_Identity=58.7951807228916, Blast_Score=489, Evalue=1e-139, Organism=Caenorhabditis elegans, GI17569969, Length=412, Percent_Identity=35.9223300970874, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI17569967, Length=412, Percent_Identity=35.9223300970874, Blast_Score=265, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6324899, Length=428, Percent_Identity=37.3831775700935, Blast_Score=265, Evalue=9e-72, Organism=Drosophila melanogaster, GI21357643, Length=410, Percent_Identity=35.1219512195122, Blast_Score=255, Evalue=3e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROA_SHEHH (B0TQC4)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001675375.1 - ProteinModelPortal: B0TQC4 - SMR: B0TQC4 - GeneID: 5904756 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_3169 - HOGENOM: HBG318080 - OMA: QYPAACN - ProtClustDB: PRK00197 - BioCyc: SHAL458817:SHAL_3169-MONOMER - GO: GO:0005737 - HAMAP: MF_00412 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 - Gene3D: G3DSA:3.40.309.10 - Gene3D: G3DSA:3.40.605.10 - PANTHER: PTHR11063:SF1 - PIRSF: PIRSF000151 - TIGRFAMs: TIGR00407
Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.2.1.41
Molecular weight: Translated: 45042; Mature: 45042
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNDEYLTALGQNAKQASYALATLSGQQKSALLRCIADKLTAAKADIVSANQQDVADAKA CCCCCEEHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC NGLSDAMIDRLLLDETRLMGVISDIDNVIGLTDPVGSEIDSRLLDNGLRLSRRRVPLGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHCCCEEEE GVIYEARPNVTVDIAVLALKTGNAVILRGGKETLASNKALCTVIRSAMVSQGLSEDCVQL EEEEECCCCCEEEEEEEEEECCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH IDNPDRSLVSGLLKLDKYVDMIVPRGGQNLQRLCAEQATIPVILGGIGICHIYVDAEANL HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECEEEEEEEEECCCCH EKAVSVIENAKVQRPTVCNALDTVLIHQSHAKQFIPVLAKHLSGLGVNFYGCDQTQAILT HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEE AEGLDVSAATDESFATEWLSLTLGIRVVADLDGAVEHIRQFSSGHSESILTDNIHTASDF ECCCCCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCEECCCCHHHHHH MNAIDSAAVYVNASTRFTDGGEFGLGAEVAVSTQKLHARGPMGLEALTTYKWLAWGDYTI HHHHCCCEEEEECCCEECCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHHHHEEEECCEEE RG CC >Mature Secondary Structure MNNDEYLTALGQNAKQASYALATLSGQQKSALLRCIADKLTAAKADIVSANQQDVADAKA CCCCCEEHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC NGLSDAMIDRLLLDETRLMGVISDIDNVIGLTDPVGSEIDSRLLDNGLRLSRRRVPLGVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHCCCEEEE GVIYEARPNVTVDIAVLALKTGNAVILRGGKETLASNKALCTVIRSAMVSQGLSEDCVQL EEEEECCCCCEEEEEEEEEECCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH IDNPDRSLVSGLLKLDKYVDMIVPRGGQNLQRLCAEQATIPVILGGIGICHIYVDAEANL HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECEEEEEEEEECCCCH EKAVSVIENAKVQRPTVCNALDTVLIHQSHAKQFIPVLAKHLSGLGVNFYGCDQTQAILT HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEE AEGLDVSAATDESFATEWLSLTLGIRVVADLDGAVEHIRQFSSGHSESILTDNIHTASDF ECCCCCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCEECCCCHHHHHH MNAIDSAAVYVNASTRFTDGGEFGLGAEVAVSTQKLHARGPMGLEALTTYKWLAWGDYTI HHHHCCCEEEEECCCEECCCCCCCCCCCEEEEHHHHHCCCCCCHHHHHHHHEEEECCEEE RG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA