Click here to switch to the map view.

The map label for this gene is yhbT [H]

Identifier: 167625020

GI number: 167625020

Start: 3791185

End: 3791697

Strand: Reverse

Name: yhbT [H]

Synonym: Shal_3108

Alternate gene names: 167625020

Gene position: 3791697-3791185 (Counterclockwise)

Preceding gene: 167625024

Following gene: 167625017

Centisome position: 72.54

GC content: 46.59

Gene sequence:

>513_bases
ATGCAAGGTTTTTTTCCTAACAAGTTAGCTCAACAAGTACTCGAATTGGGACCGAAAGTCATCGCTCGTCCGCTTTCACT
TGTGCCATTTTCCCTTAAAGCTGACCTGTTAAAGCGGATCCTAACGTTATTACTTGCAGAGCAGGCTCAGGATGATGAGC
TGGAGTTTTTAGCCGATCGTTGGGTTGCGGTAAAGGTTGAAGACTTAGGACTAACCTTTGAAGTGAGTTATAACGGCCAT
TGGCTAGTTAGGCCTGAGCAAGGGGCTGAGGTGACTTTTGCCGCACAATCGAAAGAACTACTGCTTGTCGCCGCAGCAAA
AGAAGATCCTGATACACTGTTTTTCCAGCGTAAGCTCTGCATTGAGGGCGACACTGAACTAGGGCTTGAAGTAAAGAATT
TGCTACTAAGCGTAGAGTTTGATGCTATGCCTACGGCAATTCGCGTAACGATTGCGAAGCTAGCTGAAGCGTTACAAACC
TTGCAAACGAAAGCCGAGCCGTCATTCGCTTAA

Upstream 100 bases:

>100_bases
TAAAATGGAATGAAGATCATATTTTTGATGTAAAACATGTTTGTGATCATAAAAGCTAGGTAAAATTATCTTCTTTGCCC
CATTTTGGAAACATATTCAT

Downstream 100 bases:

>100_bases
CCAACCAAGCTAACAAGATAAGAGCATACAAGGTTGCCATCGACTTAGATTGACTCATGCACTACTTGTGAGTAGTGCAT
GAATGTACGATTAAGGCGAC

Product: sterol-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQGFFPNKLAQQVLELGPKVIARPLSLVPFSLKADLLKRILTLLLAEQAQDDELEFLADRWVAVKVEDLGLTFEVSYNGH
WLVRPEQGAEVTFAAQSKELLLVAAAKEDPDTLFFQRKLCIEGDTELGLEVKNLLLSVEFDAMPTAIRVTIAKLAEALQT
LQTKAEPSFA

Sequences:

>Translated_170_residues
MQGFFPNKLAQQVLELGPKVIARPLSLVPFSLKADLLKRILTLLLAEQAQDDELEFLADRWVAVKVEDLGLTFEVSYNGH
WLVRPEQGAEVTFAAQSKELLLVAAAKEDPDTLFFQRKLCIEGDTELGLEVKNLLLSVEFDAMPTAIRVTIAKLAEALQT
LQTKAEPSFA
>Mature_170_residues
MQGFFPNKLAQQVLELGPKVIARPLSLVPFSLKADLLKRILTLLLAEQAQDDELEFLADRWVAVKVEDLGLTFEVSYNGH
WLVRPEQGAEVTFAAQSKELLLVAAAKEDPDTLFFQRKLCIEGDTELGLEVKNLLLSVEFDAMPTAIRVTIAKLAEALQT
LQTKAEPSFA

Specific function: Unknown

COG id: COG3154

COG function: function code I; Putative lipid carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789547, Length=151, Percent_Identity=44.3708609271523, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003033
- InterPro:   IPR016830 [H]

Pfam domain/function: PF02036 SCP2 [H]

EC number: NA

Molecular weight: Translated: 18880; Mature: 18880

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGFFPNKLAQQVLELGPKVIARPLSLVPFSLKADLLKRILTLLLAEQAQDDELEFLADR
CCCCCHHHHHHHHHHHCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
WVAVKVEDLGLTFEVSYNGHWLVRPEQGAEVTFAAQSKELLLVAAAKEDPDTLFFQRKLC
EEEEEEECCCEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEE
IEGDTELGLEVKNLLLSVEFDAMPTAIRVTIAKLAEALQTLQTKAEPSFA
ECCCCCCCCEEHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQGFFPNKLAQQVLELGPKVIARPLSLVPFSLKADLLKRILTLLLAEQAQDDELEFLADR
CCCCCHHHHHHHHHHHCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
WVAVKVEDLGLTFEVSYNGHWLVRPEQGAEVTFAAQSKELLLVAAAKEDPDTLFFQRKLC
EEEEEEECCCEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEE
IEGDTELGLEVKNLLLSVEFDAMPTAIRVTIAKLAEALQTLQTKAEPSFA
ECCCCCCCCEEHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]