| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625008
Identifier: 167625008
GI number: 167625008
Start: 3777992
End: 3778432
Strand: Reverse
Name: 167625008
Synonym: Shal_3095
Alternate gene names: NA
Gene position: 3778432-3777992 (Counterclockwise)
Preceding gene: 167625010
Following gene: 167625007
Centisome position: 72.29
GC content: 44.22
Gene sequence:
>441_bases ATGGCAGAGAAAATTATTGAGTTAAAAACACATATGGGTGAAGGCTGGAAAGTCACCGCTCAGGTAAGAGAACACCAATT AATAATCGATCAACCGACCGCGGGTGACGAAGGGGCTAACCCATTAGAGACGTTTATTTTTTCACTGGCTGGCTGTATTT CTACAATAGCGAGAATGGTCGCAAGAGAGCAAAAAATTAAGCTTAACCATTTTGATGTGTCCATTAAAGCACAGCTAAAT ACGTTAGGGCTGCTTGGCAAGGCTACTGACGATCCTGTTGGATTTAAACATATCGATATCACCGTTGAGATGGATGCTGC AGTCAATAGTGAGCCGTTAACCGAAGAACAAAAGCAGGTGTTTATCGATACAGTCTGTCATCGCTGCCCAGTGCATGACA ACCTGCTTAAGCCGACGTTAGTGACCCATCAAGCGGGCTAA
Upstream 100 bases:
>100_bases ACAAATTGTGAGTTATATTTGAGTTTTTAGTTAATTATCCATTAGAATAATCTTATTGAATAAGGCCTTGTTGAAAAAAG TCTAATGGAGTTGTGTTGAG
Downstream 100 bases:
>100_bases TAGTGAATATTTGCAATATTTCATCATATCTCACCTGTGATGAAGTATTGCTCGATTGCTTAAGCGACTTATCGCCTAAA GAATAGCTCGCTCCTTGTTA
Product: OsmC family protein
Products: NA
Alternate protein names: Redox Protein Regulator Of Disulfide Bond Formation; OsmC-Like Protein Superfamily Protein; OsmC-Like Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAEKIIELKTHMGEGWKVTAQVREHQLIIDQPTAGDEGANPLETFIFSLAGCISTIARMVAREQKIKLNHFDVSIKAQLN TLGLLGKATDDPVGFKHIDITVEMDAAVNSEPLTEEQKQVFIDTVCHRCPVHDNLLKPTLVTHQAG
Sequences:
>Translated_146_residues MAEKIIELKTHMGEGWKVTAQVREHQLIIDQPTAGDEGANPLETFIFSLAGCISTIARMVAREQKIKLNHFDVSIKAQLN TLGLLGKATDDPVGFKHIDITVEMDAAVNSEPLTEEQKQVFIDTVCHRCPVHDNLLKPTLVTHQAG >Mature_145_residues AEKIIELKTHMGEGWKVTAQVREHQLIIDQPTAGDEGANPLETFIFSLAGCISTIARMVAREQKIKLNHFDVSIKAQLNT LGLLGKATDDPVGFKHIDITVEMDAAVNSEPLTEEQKQVFIDTVCHRCPVHDNLLKPTLVTHQAG
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16123; Mature: 15992
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKIIELKTHMGEGWKVTAQVREHQLIIDQPTAGDEGANPLETFIFSLAGCISTIARMV CCCHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AREQKIKLNHFDVSIKAQLNTLGLLGKATDDPVGFKHIDITVEMDAAVNSEPLTEEQKQV HHHHHEEEEEEEEEEEEEECEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHH FIDTVCHRCPVHDNLLKPTLVTHQAG HHHHHHHHCCCCCCCCCCEEEEECCC >Mature Secondary Structure AEKIIELKTHMGEGWKVTAQVREHQLIIDQPTAGDEGANPLETFIFSLAGCISTIARMV CCHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AREQKIKLNHFDVSIKAQLNTLGLLGKATDDPVGFKHIDITVEMDAAVNSEPLTEEQKQV HHHHHEEEEEEEEEEEEEECEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHH FIDTVCHRCPVHDNLLKPTLVTHQAG HHHHHHHHCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA