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The map label for this gene is yeiR [H]

Identifier: 167625003

GI number: 167625003

Start: 3771037

End: 3772146

Strand: Reverse

Name: yeiR [H]

Synonym: Shal_3090

Alternate gene names: 167625003

Gene position: 3772146-3771037 (Counterclockwise)

Preceding gene: 167625004

Following gene: 167625002

Centisome position: 72.17

GC content: 47.84

Gene sequence:

>1110_bases
ATGATCCAGAAAATTATCCCGACCAATGTGATTACCGGCTTTTTAGGAGTTGGCAAGACTTCATTAATTAAGACCCTACT
GCAGCATAAGCCTGAAGGGGAGGTGTGGGCCGTTCTAGTGAATGAGTTTGGCGAAATTGGTATTGATGCCAGTCTGCTTG
ATACAGGCACTGAACAGGTGCAGATCAAAGAGGTGGCAGGGGGCTGTATGTGCTGCGCCGCGGGTCTACCTATGCAGGTG
GCGATTAACCAGCTGATAGCCAAAGCGAAACCCGATAGATTGCTGATTGAACCAACGGGTTTAGGCCACCCAAAAGAGGT
ACTTAAGGTGCTGACTCAGCCACATTACCAGCAAGTTTTGGCGATGAAAGCCTGCGTGACCTTGGTGGATGCGAGAAAGC
TTGATGATAGCCGCTATACCGAACATGAGATCTTTAATCAGCAGCTGCAAGTTGCTGACGTGGTGCTAGCGAGCAAGGCC
GATAGCTATCAAGCTGCATTAATCCCGCGACTATCCGATTACCTGAATTCAATCAATGGCGCCATGAGCGCATCTAGCAA
TGAAAGCGTGCCAATTAAGCCCTGGAGTCTAATGCAAGCTACTGAGCTTAGCGGTGCGATTATGGCGCTGCTAGATGGGC
CCCATAGAGGTATTACCACAGTAAGTACTGCGTCCCTCGGCATCAAATCAACAATGCTGGGAGCTGGCGAGACGAATACC
CAGACGCCACGTCTAATCGATCTTAACTATAGCCCACTATTTTCAGAGCAAGCTCCTGTTCAAAATATTGATTTTGATGG
CCGAGGGATCTTGCGTAAAACCAATCAGGGCGATGGGTTTTATAGTTGTGGCTGGGTGTTTGATCCAAGCTATGAGTTCG
ACTTTGACCCGTTGCTGGCATTAATTAAAAACTTACAGGTTGCACGAATTAAAGCGGTGATGATCACTGAAGAGGGAATT
GCGGGCTTTAATTGCGTGGACAGTGAGTTATCAATCGTTGAACTTGATGATGCAATGGACTCTCGGATTGAGCTGCTGTC
CATGTCAAAAATCGATATAGAGCGTGTGGAAGAGGCGTTATTAACGTTAGCTCACCGCCTTCGATTCTAG

Upstream 100 bases:

>100_bases
ATAACTCATAGATAAACCTAACTTACATAAGGCTATGACGTGACATTTGAGCCTTTTAGCGATTAGAATCTTCGGCTACT
AGATAGACAGAGCTGACGTC

Downstream 100 bases:

>100_bases
TCTGTTTTAATGTTACCTGTTTTACGCTCTTGCATGTTAACTCTTAGATATTTCGAGTATCTTATGAGTGATTAAAGAGC
TGTAAATCGGCGAAAAAATA

Product: cobalamin synthesis protein P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIQKIIPTNVITGFLGVGKTSLIKTLLQHKPEGEVWAVLVNEFGEIGIDASLLDTGTEQVQIKEVAGGCMCCAAGLPMQV
AINQLIAKAKPDRLLIEPTGLGHPKEVLKVLTQPHYQQVLAMKACVTLVDARKLDDSRYTEHEIFNQQLQVADVVLASKA
DSYQAALIPRLSDYLNSINGAMSASSNESVPIKPWSLMQATELSGAIMALLDGPHRGITTVSTASLGIKSTMLGAGETNT
QTPRLIDLNYSPLFSEQAPVQNIDFDGRGILRKTNQGDGFYSCGWVFDPSYEFDFDPLLALIKNLQVARIKAVMITEEGI
AGFNCVDSELSIVELDDAMDSRIELLSMSKIDIERVEEALLTLAHRLRF

Sequences:

>Translated_369_residues
MIQKIIPTNVITGFLGVGKTSLIKTLLQHKPEGEVWAVLVNEFGEIGIDASLLDTGTEQVQIKEVAGGCMCCAAGLPMQV
AINQLIAKAKPDRLLIEPTGLGHPKEVLKVLTQPHYQQVLAMKACVTLVDARKLDDSRYTEHEIFNQQLQVADVVLASKA
DSYQAALIPRLSDYLNSINGAMSASSNESVPIKPWSLMQATELSGAIMALLDGPHRGITTVSTASLGIKSTMLGAGETNT
QTPRLIDLNYSPLFSEQAPVQNIDFDGRGILRKTNQGDGFYSCGWVFDPSYEFDFDPLLALIKNLQVARIKAVMITEEGI
AGFNCVDSELSIVELDDAMDSRIELLSMSKIDIERVEEALLTLAHRLRF
>Mature_369_residues
MIQKIIPTNVITGFLGVGKTSLIKTLLQHKPEGEVWAVLVNEFGEIGIDASLLDTGTEQVQIKEVAGGCMCCAAGLPMQV
AINQLIAKAKPDRLLIEPTGLGHPKEVLKVLTQPHYQQVLAMKACVTLVDARKLDDSRYTEHEIFNQQLQVADVVLASKA
DSYQAALIPRLSDYLNSINGAMSASSNESVPIKPWSLMQATELSGAIMALLDGPHRGITTVSTASLGIKSTMLGAGETNT
QTPRLIDLNYSPLFSEQAPVQNIDFDGRGILRKTNQGDGFYSCGWVFDPSYEFDFDPLLALIKNLQVARIKAVMITEEGI
AGFNCVDSELSIVELDDAMDSRIELLSMSKIDIERVEEALLTLAHRLRF

Specific function: Unknown

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=186, Percent_Identity=32.258064516129, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI223941779, Length=186, Percent_Identity=32.258064516129, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI146231952, Length=186, Percent_Identity=32.258064516129, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI33469141, Length=186, Percent_Identity=31.7204301075269, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI148727351, Length=186, Percent_Identity=31.7204301075269, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788499, Length=358, Percent_Identity=36.3128491620112, Blast_Score=207, Evalue=6e-55,
Organism=Escherichia coli, GI87082430, Length=181, Percent_Identity=30.939226519337, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40260; Mature: 40260

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKIIPTNVITGFLGVGKTSLIKTLLQHKPEGEVWAVLVNEFGEIGIDASLLDTGTEQV
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCHHHHCCCCCCE
QIKEVAGGCMCCAAGLPMQVAINQLIAKAKPDRLLIEPTGLGHPKEVLKVLTQPHYQQVL
EEHHHCCCCEEHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHH
AMKACVTLVDARKLDDSRYTEHEIFNQQLQVADVVLASKADSYQAALIPRLSDYLNSING
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AMSASSNESVPIKPWSLMQATELSGAIMALLDGPHRGITTVSTASLGIKSTMLGAGETNT
HCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEHHHCCHHHHEECCCCCCC
QTPRLIDLNYSPLFSEQAPVQNIDFDGRGILRKTNQGDGFYSCGWVFDPSYEFDFDPLLA
CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECEEECCCCCCCHHHHHH
LIKNLQVARIKAVMITEEGIAGFNCVDSELSIVELDDAMDSRIELLSMSKIDIERVEEAL
HHHCCCCEEEEEEEEECCCCCCCCEECCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHH
LTLAHRLRF
HHHHHHHCC
>Mature Secondary Structure
MIQKIIPTNVITGFLGVGKTSLIKTLLQHKPEGEVWAVLVNEFGEIGIDASLLDTGTEQV
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCHHHHCCCCCCE
QIKEVAGGCMCCAAGLPMQVAINQLIAKAKPDRLLIEPTGLGHPKEVLKVLTQPHYQQVL
EEHHHCCCCEEHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHH
AMKACVTLVDARKLDDSRYTEHEIFNQQLQVADVVLASKADSYQAALIPRLSDYLNSING
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AMSASSNESVPIKPWSLMQATELSGAIMALLDGPHRGITTVSTASLGIKSTMLGAGETNT
HCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEHHHCCHHHHEECCCCCCC
QTPRLIDLNYSPLFSEQAPVQNIDFDGRGILRKTNQGDGFYSCGWVFDPSYEFDFDPLLA
CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECEEECCCCCCCHHHHHH
LIKNLQVARIKAVMITEEGIAGFNCVDSELSIVELDDAMDSRIELLSMSKIDIERVEEAL
HHHCCCCEEEEEEEEECCCCCCCCEECCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHH
LTLAHRLRF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]