Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is pstS [H]

Identifier: 167624970

GI number: 167624970

Start: 3727989

End: 3728960

Strand: Reverse

Name: pstS [H]

Synonym: Shal_3057

Alternate gene names: 167624970

Gene position: 3728960-3727989 (Counterclockwise)

Preceding gene: 167624971

Following gene: 167624968

Centisome position: 71.34

GC content: 45.16

Gene sequence:

>972_bases
ATGAAACTGAAACAACTTGTTGGCGCGGTAAGTTTTACTGCAGCGACTGTATTTTCTACAGCATCAATGGCTGAAATTGA
CCAGTCTTTACCCACTTACGAAAAGACAAGCGGCGTGTCAGGTAATTTATCTTCCGTTGGCTCAGATACATTAGCGAACA
TGATGACGCTTTGGGCTGAAGATTTTAAACAACTCTATCCAAACGTTAATATCCAAATTCAAGCTGCAGGGTCTTCTACT
GCGCCACCGGCATTGACTGAAGGAACTTCTCAATTCGGTCCTATGAGCCGTAAGATGAAGCCGAATGAAGTTGAGGCATT
TGAAAAGCATTATGGCTATCAGCCAACACCTATCCGCGTCGCAATTGACGCGCTCGCAGTATTTGTCCATAAAGATAACC
CGATTGAAGGCATGAGCATCGAGCAGATCGACGGCATCTTCTCTTCTACAGATAAGTGCGGTGGCGGCGATGTGACACGC
TGGGGACAAGTTGGCCTTGAGGGCAGCTGGACTGCGAGAGATATACAACTTTATGGCCGTAACTCTGTATCAGGTACTTA
CGGTTACTTTAAAAAGAAAGCACTGTGTAAAGGTGATTTCAAAGCAAACGTAAACGAGCAGCCAGGCTCAGCCTCTGTCG
TACAGGCAGTCTCTCAATCACTTAATTCGATTGGTTACTCTGGCATTGGTTATAAGACTGCTGGCGTTAAAGCGGTTGCG
ATTTCTAAGAAAGGAACTAACTATATACCTGCAACGGCAGACAATGCGGCAACGGGTAAGTATCCACTATCTCGTTACCT
CTACGTTTATGTGAATAAACACCCAAACAAAGCTCTATCGCCAATGGATCGAGAGTTCATTCGCTACGTGCTTTCTAAGC
AAGGTCAGCAAATTGTAGAAAAAGACGGTTATGTTGCACTGCCACGCAGTGTTATCGCTAAAGACTTAGCTAAAGTGGGG
ATCCGTCTTTAG

Upstream 100 bases:

>100_bases
TTGTCATCTAAGTGTCACTTATGAGTAATAGACTTGTCATCAATGGAGTCAATACTGACAGCGTTTTAAAAACGAAGATA
GATAAACACTGGAGCAAAGA

Downstream 100 bases:

>100_bases
TCACTAATTAACCTCGATGATACAAGTGAACATTAATGAAAAGGCCTCTATTGAGGCTTTTTTGTTTTCGTGATTTAGTC
GGGACGCAACATAGGTAGTA

Product: phosphate-binding protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKLKQLVGAVSFTAATVFSTASMAEIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAEDFKQLYPNVNIQIQAAGSST
APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTPIRVAIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTR
WGQVGLEGSWTARDIQLYGRNSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQAVSQSLNSIGYSGIGYKTAGVKAVA
ISKKGTNYIPATADNAATGKYPLSRYLYVYVNKHPNKALSPMDREFIRYVLSKQGQQIVEKDGYVALPRSVIAKDLAKVG
IRL

Sequences:

>Translated_323_residues
MKLKQLVGAVSFTAATVFSTASMAEIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAEDFKQLYPNVNIQIQAAGSST
APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTPIRVAIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTR
WGQVGLEGSWTARDIQLYGRNSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQAVSQSLNSIGYSGIGYKTAGVKAVA
ISKKGTNYIPATADNAATGKYPLSRYLYVYVNKHPNKALSPMDREFIRYVLSKQGQQIVEKDGYVALPRSVIAKDLAKVG
IRL
>Mature_323_residues
MKLKQLVGAVSFTAATVFSTASMAEIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAEDFKQLYPNVNIQIQAAGSST
APPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTPIRVAIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTR
WGQVGLEGSWTARDIQLYGRNSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQAVSQSLNSIGYSGIGYKTAGVKAVA
ISKKGTNYIPATADNAATGKYPLSRYLYVYVNKHPNKALSPMDREFIRYVLSKQGQQIVEKDGYVALPRSVIAKDLAKVG
IRL

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34813; Mature: 34813

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKQLVGAVSFTAATVFSTASMAEIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHH
DFKQLYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTPIRV
HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
AIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTRWGQVGLEGSWTARDIQLYGR
EEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECC
NSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQAVSQSLNSIGYSGIGYKTAGVKAVA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEE
ISKKGTNYIPATADNAATGKYPLSRYLYVYVNKHPNKALSPMDREFIRYVLSKQGQQIVE
EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHH
KDGYVALPRSVIAKDLAKVGIRL
CCCCEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLKQLVGAVSFTAATVFSTASMAEIDQSLPTYEKTSGVSGNLSSVGSDTLANMMTLWAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHH
DFKQLYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEAFEKHYGYQPTPIRV
HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
AIDALAVFVHKDNPIEGMSIEQIDGIFSSTDKCGGGDVTRWGQVGLEGSWTARDIQLYGR
EEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECC
NSVSGTYGYFKKKALCKGDFKANVNEQPGSASVVQAVSQSLNSIGYSGIGYKTAGVKAVA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEE
ISKKGTNYIPATADNAATGKYPLSRYLYVYVNKHPNKALSPMDREFIRYVLSKQGQQIVE
EECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHH
KDGYVALPRSVIAKDLAKVGIRL
CCCCEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA