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The map label for this gene is etfB [H]

Identifier: 167624859

GI number: 167624859

Start: 3580047

End: 3580796

Strand: Reverse

Name: etfB [H]

Synonym: Shal_2945

Alternate gene names: 167624859

Gene position: 3580796-3580047 (Counterclockwise)

Preceding gene: 167624867

Following gene: 167624858

Centisome position: 68.51

GC content: 45.87

Gene sequence:

>750_bases
ATGAAAGTATTGGTGCCAGTTAAACGTGTCGTCGATGCCAACGTAAAAGTCAGGGTTAATGCTGACAATACAGGCGTTGA
TACCGCAAACCTAAAAATGGCGATTAACCCTTTTTGTGAGATTGCCGTTGAAGAAGCCGTTCGTTTAAAGGAAGCAGGAA
GCGCCTCTGAAATAGTCGTATTAAGCGTTGGACCTAAAGCCTCGCAGGAGCAGCTAAGAACTGCACTTGCATTAGGAGCC
GATCGCGCAATCCATATCGAAACCGATGAAGACCTTGTTCCGCTATCAATTGCTAAGCTTATTCATGCTGTACAGCAAAA
AGAGCAAGCTCAGTTAGTTATTCTTGGTAAGCAGTCAATTGATGGTGATAACAATCAAACCGGCCAAATGCTCGCCGCTA
TCGCTAAGATGCCTCAGGCAACATTTGCCTCTGAAGTTAAGTTCGATGGCGATAAACTTGTAGTGACTCGTGAAATTGAC
GGCGGCCTACAAACCGTTAATTTGTCGTTGCCAGCAGTCGTGACTGCGGACCTTCGTTTAAACGAGCCGCGTTATGCCAA
GCTGCCCAACATTATGAAAGCTAAGCGCAAGCCGCTTGAGACGTTTACCCCTGCGGATTTTGACGTCACACTTAAATCTC
ATCAGACAATTATTAAAGTGACACCACCAGCCCAGCGCAGTGGTGGTGTGATGGTAGCGTCTGTAGAAGAGTTGGTTGAA
AAGTTAAAGAATGAAGCGAAGGTGATCTAA

Upstream 100 bases:

>100_bases
CACGTAAAGTGGCTTTAATTTCGGTAATCGTAGTTGGGCATTATATTGCTGCTAGGTTACTTAATTTCGATCATTATAAG
AGACGTAAGAAGGAAGCCCT

Downstream 100 bases:

>100_bases
TGGCAATTTTAGTATTAGCAGAACACGATAACGCCAGTCTAAAACTGGATACCGCTAAGGTCGTTGCATGTGCCGAAGCC
ATCGGTGGGGATATAGACCT

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVVLSVGPKASQEQLRTALALGA
DRAIHIETDEDLVPLSIAKLIHAVQQKEQAQLVILGKQSIDGDNNQTGQMLAAIAKMPQATFASEVKFDGDKLVVTREID
GGLQTVNLSLPAVVTADLRLNEPRYAKLPNIMKAKRKPLETFTPADFDVTLKSHQTIIKVTPPAQRSGGVMVASVEELVE
KLKNEAKVI

Sequences:

>Translated_249_residues
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVVLSVGPKASQEQLRTALALGA
DRAIHIETDEDLVPLSIAKLIHAVQQKEQAQLVILGKQSIDGDNNQTGQMLAAIAKMPQATFASEVKFDGDKLVVTREID
GGLQTVNLSLPAVVTADLRLNEPRYAKLPNIMKAKRKPLETFTPADFDVTLKSHQTIIKVTPPAQRSGGVMVASVEELVE
KLKNEAKVI
>Mature_249_residues
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVVLSVGPKASQEQLRTALALGA
DRAIHIETDEDLVPLSIAKLIHAVQQKEQAQLVILGKQSIDGDNNQTGQMLAAIAKMPQATFASEVKFDGDKLVVTREID
GGLQTVNLSLPAVVTADLRLNEPRYAKLPNIMKAKRKPLETFTPADFDVTLKSHQTIIKVTPPAQRSGGVMVASVEELVE
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=56.3492063492063, Blast_Score=280, Evalue=1e-75,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=55.6962025316456, Blast_Score=261, Evalue=5e-70,
Organism=Escherichia coli, GI87081682, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=26.3779527559055, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=48.6166007905138, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=46.875, Blast_Score=212, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=51.792828685259, Blast_Score=226, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=51.792828685259, Blast_Score=226, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26872; Mature: 26872

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVV
CCEEECCHHHHCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEE
LSVGPKASQEQLRTALALGADRAIHIETDEDLVPLSIAKLIHAVQQKEQAQLVILGKQSI
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
DGDNNQTGQMLAAIAKMPQATFASEVKFDGDKLVVTREIDGGLQTVNLSLPAVVTADLRL
CCCCCCHHHHHHHHHHCCCHHHHHHEEECCCEEEEEEECCCCEEEEEEECCEEEEEEEEE
NEPRYAKLPNIMKAKRKPLETFTPADFDVTLKSHQTIIKVTPPAQRSGGVMVASVEELVE
CCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVPVKRVVDANVKVRVNADNTGVDTANLKMAINPFCEIAVEEAVRLKEAGSASEIVV
CCEEECCHHHHCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEE
LSVGPKASQEQLRTALALGADRAIHIETDEDLVPLSIAKLIHAVQQKEQAQLVILGKQSI
EEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
DGDNNQTGQMLAAIAKMPQATFASEVKFDGDKLVVTREIDGGLQTVNLSLPAVVTADLRL
CCCCCCHHHHHHHHHHCCCHHHHHHEEECCCEEEEEEECCCCEEEEEEECCEEEEEEEEE
NEPRYAKLPNIMKAKRKPLETFTPADFDVTLKSHQTIIKVTPPAQRSGGVMVASVEELVE
CCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]