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The map label for this gene is 167624756

Identifier: 167624756

GI number: 167624756

Start: 3453255

End: 3456185

Strand: Reverse

Name: 167624756

Synonym: Shal_2840

Alternate gene names: NA

Gene position: 3456185-3453255 (Counterclockwise)

Preceding gene: 167624762

Following gene: 167624755

Centisome position: 66.12

GC content: 48.55

Gene sequence:

>2931_bases
ATGTCAACAGATCCAACTAAGCCACAAATACACACTGGTAAGTTTAAAGTTCACGCTTTAGCGCTTGCCTGCTCAGCTAT
TCTTTTTCCCGGTACTGCATTCGCGACTTCTGAGGTCGCACCGACGGCCAAAGAATCATCAAAGGCCGCTCATGGTAAAG
AGCTGCAGAGCCGCTTTGAAAAAGGCGCTAATATTCCAGGCCAGCAGAAGAGTGCAGAGAAAAACCAACGTCAGCATCCG
ATCAAGGGGAAAGCTGAAAAAAAGATTGAAGGGCCGATGGGAGCATCTGGCCCGACAGCTGAAGCCGAAGACAATATGTG
TAGCAGTGAGTTAGCCAACCTAAGCGGTGAAGCGCTGTTTGATGCCGTTAGACAAGCGGAGATCTCATGTATCTCTGAGT
TGTACTCTAGAAATGATGCCGTCTCGGTTGCCGCCTATCAGACAGAAAATGTGGTTTCAGTTGCCAATCAAGCAGCCGCT
ATTGCAGCAACCTATGACAGCAGCACAGGTTACGAAATGCGTAACCTGTTCTACTTCTTGCGCGGTGCATTTTATATTGA
GTTTTACAATGATGATTTAGCTTATAGCGACACCCAAGCCGCAGATGCGGTTTATGCTGCGTTAGTTGAATATGCGAAGA
ATCCAAAGCTTTTTGAGATCACTCCTTCTGCGGGTGATACTTTGATGGAGTTCTTTACATCGTGGGCGAGCAGCGATCAC
ATCCTAGAGAGTGTGCCCGTGATCACCGATTACTTGCAGATGTTTAACGCAGACTTTCTTGCTAGCAATCGCCACCGCGC
CGCAATGACGAGCGCATTAACCACGCTTTACTACGGAAGCTGGGAAGAGGCTTACAACAGCAAAGCCATGGAGCATGGCG
AGCTAATCGATGCGCTACTGAACATTGCCACTGCTGATTATATTATTAACTCAGACTACCAGTATGAGTCGACCGATGCC
TTTCATGAGTTTGGTCGCTTCTATGAGTATCAAAAGTACTGGGATCTTCCGCAAAGCTTGAAAACGCGCCTCAATGACGG
TGTTGAGCTGTATATGAGTAAGTTTGAGCGCATGTCTGCACAGTGGGCTGACGGTGCAGGTTACTTAGATTATTACAATC
CTGGTGACTGTGAGCAGTTCGGTATTTGTGGGTGGGAAGAGGAGCTTGAACAAACGGCTCTACCAATCAATTACAGCTGT
AGCGATACCATCTACATTCGCGCCCAGCAGTTAACCAACGATGAGCTCCAAAGCTCTTGCGATCTTATGGGCGGTGAAGA
GACACTATTCCATGACGTGCTTGCAACGGGTTATCAGCCAGTAGCCGATGACTTGAATGAAAGCCTAGAAGTGAACATCT
TCGACAGTTACGATGATTATGCCCAGTACGCAAGTGTGATTTTTGGGATCAATACCAACAACGGTGGCATGTACTTAGAA
GGCACGCCCTCTCAAGAGGGCAATCATGCACGCTTTATTGCTCATGAAGCCACCTGGACTGACGAGATCTTGGTGTGGAA
CTTAAAGCATGAGTATGTACATTACCTCGATGGCCGTTTTAACCTTTATGGCGCGTTTAACTACTTCGATATTGATACCG
GCAAGTCGGTATGGTGGACAGAAGGCTTGGCTGAATATATCTCGAAGCAAAACCGTAATGACGGTGCTATCGAGTTGGGG
CGCTCACAGGCTTATAGCCTAAGTGAGATTCTCTCGAATACTTATGATAGTGGTTCTGACCGAGTCTATAGCTGGGGCTA
CTTAGCGGTTCGCTTCCTATTTGAAAATCACAGAAGTGATGTCGATGCACTATTAGTGCTAGCTCGTGGCGGCGATGCTG
ATGGCTGGTTAGCCTATATCGATAATACCATTGGCCAGAACTATAACAGCGAGTGGAACACCTGGTTGGCGTCAGTGAGC
AGTAATGATGACTCAATCAGCACAGGCATTACTCCGCCAGTTGACTCTGATGGAGATGGTGTTATTGATAGTCAAGATGC
CTTCCCGCATGATCCGAGTGAAACTCATGACACTGACGGTGATGGTGTGGGCGATAACGCCGATGCATTCCCAACCGATG
CCAATGAAACAGTCGATACCGACGGCGACGGTGTCGGTGACAATGGCGATGTGTTCCCAACCGATCCAACTGAGTGGGCT
GATTCTGATGGCGACGGAATTGGTGATAATGCCGATACCGATGGGCCTGTAGACCCTGTTGATCCGGTAGAGCCTGTCGA
GCATTGCGGCGCGATATCCATTACCGACGGTAAGTTAACACAGGAGCAGACTGAGTGTGTTGCAGGTAGTGATATCAACT
ACTTCTACACCTATGTTGAACAAGATAACACACCGCTTTATATCACGACATCGGGTGGTGAAGGTGATGTTGACCTGTTC
TTCAACCAAGAAATTTGGGCCAAGCCGTCAGCTTATACCGCTAAAGCGACAGCAGCGGGTAATGACGAACAGCTAAACGT
TATCGCTAACCGAGGTTGGGTATACATTAGCCTTGTGGCAACTGCTGAGTATGAAGGGGTTAGCTTAAGTGTGAGCTTAA
CTGATGGTGGCGATACTGGCACGCCCCCTGTGTTAGTGGCTGATGCGTGTGCGACACAATCTCCTTATAGCTATGGTGGT
GTCGAGTTCGGTGAAGCCGTCTGTATTGCAGACGGCCACTCAAGCTACTACTTCTATGTTCCGGCGGGTACTGAAGAGAT
TAGCGTAGCCAGTGGTCATGGCAGCGGCGATGTGAACCTTTATGGCAACAGCCAAACATGGGCTGGAGTCGACTCGTATG
AGGTGAAGTCTGAGAGTAGCGGTAACGTAGAGAGTCTAACCATTGCCACACCTGTGGAAGGTTGGTACTACATCAGTGCC
GATGGCGCACCATCGAGTGAAGGTGCAAGCCTAGTGGTTGATATTAAGTAA

Upstream 100 bases:

>100_bases
ATGCGATAACTAAACCAATAAGTAAACCAATACTAGTCCGCTTATCACTTCCCTGTATTAGGTGATTTAAGGAGAGAGTC
GCAAACAATTGGAGTTAAAT

Downstream 100 bases:

>100_bases
GCTAGGATATTAAGAACAATAGTTCGATTATCAGTAACCAAAGCCGACTCCTAAAGGGTCGGCTTTTTTTACATTAAAAA
TACCTTAGTTAAATTATCTT

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 976; Mature: 975

Protein sequence:

>976_residues
MSTDPTKPQIHTGKFKVHALALACSAILFPGTAFATSEVAPTAKESSKAAHGKELQSRFEKGANIPGQQKSAEKNQRQHP
IKGKAEKKIEGPMGASGPTAEAEDNMCSSELANLSGEALFDAVRQAEISCISELYSRNDAVSVAAYQTENVVSVANQAAA
IAATYDSSTGYEMRNLFYFLRGAFYIEFYNDDLAYSDTQAADAVYAALVEYAKNPKLFEITPSAGDTLMEFFTSWASSDH
ILESVPVITDYLQMFNADFLASNRHRAAMTSALTTLYYGSWEEAYNSKAMEHGELIDALLNIATADYIINSDYQYESTDA
FHEFGRFYEYQKYWDLPQSLKTRLNDGVELYMSKFERMSAQWADGAGYLDYYNPGDCEQFGICGWEEELEQTALPINYSC
SDTIYIRAQQLTNDELQSSCDLMGGEETLFHDVLATGYQPVADDLNESLEVNIFDSYDDYAQYASVIFGINTNNGGMYLE
GTPSQEGNHARFIAHEATWTDEILVWNLKHEYVHYLDGRFNLYGAFNYFDIDTGKSVWWTEGLAEYISKQNRNDGAIELG
RSQAYSLSEILSNTYDSGSDRVYSWGYLAVRFLFENHRSDVDALLVLARGGDADGWLAYIDNTIGQNYNSEWNTWLASVS
SNDDSISTGITPPVDSDGDGVIDSQDAFPHDPSETHDTDGDGVGDNADAFPTDANETVDTDGDGVGDNGDVFPTDPTEWA
DSDGDGIGDNADTDGPVDPVDPVEPVEHCGAISITDGKLTQEQTECVAGSDINYFYTYVEQDNTPLYITTSGGEGDVDLF
FNQEIWAKPSAYTAKATAAGNDEQLNVIANRGWVYISLVATAEYEGVSLSVSLTDGGDTGTPPVLVADACATQSPYSYGG
VEFGEAVCIADGHSSYYFYVPAGTEEISVASGHGSGDVNLYGNSQTWAGVDSYEVKSESSGNVESLTIATPVEGWYYISA
DGAPSSEGASLVVDIK

Sequences:

>Translated_976_residues
MSTDPTKPQIHTGKFKVHALALACSAILFPGTAFATSEVAPTAKESSKAAHGKELQSRFEKGANIPGQQKSAEKNQRQHP
IKGKAEKKIEGPMGASGPTAEAEDNMCSSELANLSGEALFDAVRQAEISCISELYSRNDAVSVAAYQTENVVSVANQAAA
IAATYDSSTGYEMRNLFYFLRGAFYIEFYNDDLAYSDTQAADAVYAALVEYAKNPKLFEITPSAGDTLMEFFTSWASSDH
ILESVPVITDYLQMFNADFLASNRHRAAMTSALTTLYYGSWEEAYNSKAMEHGELIDALLNIATADYIINSDYQYESTDA
FHEFGRFYEYQKYWDLPQSLKTRLNDGVELYMSKFERMSAQWADGAGYLDYYNPGDCEQFGICGWEEELEQTALPINYSC
SDTIYIRAQQLTNDELQSSCDLMGGEETLFHDVLATGYQPVADDLNESLEVNIFDSYDDYAQYASVIFGINTNNGGMYLE
GTPSQEGNHARFIAHEATWTDEILVWNLKHEYVHYLDGRFNLYGAFNYFDIDTGKSVWWTEGLAEYISKQNRNDGAIELG
RSQAYSLSEILSNTYDSGSDRVYSWGYLAVRFLFENHRSDVDALLVLARGGDADGWLAYIDNTIGQNYNSEWNTWLASVS
SNDDSISTGITPPVDSDGDGVIDSQDAFPHDPSETHDTDGDGVGDNADAFPTDANETVDTDGDGVGDNGDVFPTDPTEWA
DSDGDGIGDNADTDGPVDPVDPVEPVEHCGAISITDGKLTQEQTECVAGSDINYFYTYVEQDNTPLYITTSGGEGDVDLF
FNQEIWAKPSAYTAKATAAGNDEQLNVIANRGWVYISLVATAEYEGVSLSVSLTDGGDTGTPPVLVADACATQSPYSYGG
VEFGEAVCIADGHSSYYFYVPAGTEEISVASGHGSGDVNLYGNSQTWAGVDSYEVKSESSGNVESLTIATPVEGWYYISA
DGAPSSEGASLVVDIK
>Mature_975_residues
STDPTKPQIHTGKFKVHALALACSAILFPGTAFATSEVAPTAKESSKAAHGKELQSRFEKGANIPGQQKSAEKNQRQHPI
KGKAEKKIEGPMGASGPTAEAEDNMCSSELANLSGEALFDAVRQAEISCISELYSRNDAVSVAAYQTENVVSVANQAAAI
AATYDSSTGYEMRNLFYFLRGAFYIEFYNDDLAYSDTQAADAVYAALVEYAKNPKLFEITPSAGDTLMEFFTSWASSDHI
LESVPVITDYLQMFNADFLASNRHRAAMTSALTTLYYGSWEEAYNSKAMEHGELIDALLNIATADYIINSDYQYESTDAF
HEFGRFYEYQKYWDLPQSLKTRLNDGVELYMSKFERMSAQWADGAGYLDYYNPGDCEQFGICGWEEELEQTALPINYSCS
DTIYIRAQQLTNDELQSSCDLMGGEETLFHDVLATGYQPVADDLNESLEVNIFDSYDDYAQYASVIFGINTNNGGMYLEG
TPSQEGNHARFIAHEATWTDEILVWNLKHEYVHYLDGRFNLYGAFNYFDIDTGKSVWWTEGLAEYISKQNRNDGAIELGR
SQAYSLSEILSNTYDSGSDRVYSWGYLAVRFLFENHRSDVDALLVLARGGDADGWLAYIDNTIGQNYNSEWNTWLASVSS
NDDSISTGITPPVDSDGDGVIDSQDAFPHDPSETHDTDGDGVGDNADAFPTDANETVDTDGDGVGDNGDVFPTDPTEWAD
SDGDGIGDNADTDGPVDPVDPVEPVEHCGAISITDGKLTQEQTECVAGSDINYFYTYVEQDNTPLYITTSGGEGDVDLFF
NQEIWAKPSAYTAKATAAGNDEQLNVIANRGWVYISLVATAEYEGVSLSVSLTDGGDTGTPPVLVADACATQSPYSYGGV
EFGEAVCIADGHSSYYFYVPAGTEEISVASGHGSGDVNLYGNSQTWAGVDSYEVKSESSGNVESLTIATPVEGWYYISAD
GAPSSEGASLVVDIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PKD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013510
- InterPro:   IPR002169
- InterPro:   IPR013661
- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD [H]

EC number: =3.4.24.3 [H]

Molecular weight: Translated: 106442; Mature: 106311

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDPTKPQIHTGKFKVHALALACSAILFPGTAFATSEVAPTAKESSKAAHGKELQSRFE
CCCCCCCCCEECCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KGANIPGQQKSAEKNQRQHPIKGKAEKKIEGPMGASGPTAEAEDNMCSSELANLSGEALF
HCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
DAVRQAEISCISELYSRNDAVSVAAYQTENVVSVANQAAAIAATYDSSTGYEMRNLFYFL
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
RGAFYIEFYNDDLAYSDTQAADAVYAALVEYAKNPKLFEITPSAGDTLMEFFTSWASSDH
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCH
ILESVPVITDYLQMFNADFLASNRHRAAMTSALTTLYYGSWEEAYNSKAMEHGELIDALL
HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NIATADYIINSDYQYESTDAFHEFGRFYEYQKYWDLPQSLKTRLNDGVELYMSKFERMSA
HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHC
QWADGAGYLDYYNPGDCEQFGICGWEEELEQTALPINYSCSDTIYIRAQQLTNDELQSSC
CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCHHHHHHH
DLMGGEETLFHDVLATGYQPVADDLNESLEVNIFDSYDDYAQYASVIFGINTNNGGMYLE
HCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHEEEEEEEEECCCCEEEE
GTPSQEGNHARFIAHEATWTDEILVWNLKHEYVHYLDGRFNLYGAFNYFDIDTGKSVWWT
CCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHCCEEEEEEEEEEEECCCCCCCHHH
EGLAEYISKQNRNDGAIELGRSQAYSLSEILSNTYDSGSDRVYSWGYLAVRFLFENHRSD
HHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCC
VDALLVLARGGDADGWLAYIDNTIGQNYNSEWNTWLASVSSNDDSISTGITPPVDSDGDG
CEEEEEEEECCCCCCEEEEEEHHHCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCC
VIDSQDAFPHDPSETHDTDGDGVGDNADAFPTDANETVDTDGDGVGDNGDVFPTDPTEWA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDGDGIGDNADTDGPVDPVDPVEPVEHCGAISITDGKLTQEQTECVAGSDINYFYTYVE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCHHHHHHHCCCCCEEEEEEEE
QDNTPLYITTSGGEGDVDLFFNQEIWAKPSAYTAKATAAGNDEQLNVIANRGWVYISLVA
CCCCEEEEEECCCCCCEEEEECCHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEEE
TAEYEGVSLSVSLTDGGDTGTPPVLVADACATQSPYSYGGVEFGEAVCIADGHSSYYFYV
EECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEE
PAGTEEISVASGHGSGDVNLYGNSQTWAGVDSYEVKSESSGNVESLTIATPVEGWYYISA
ECCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEC
DGAPSSEGASLVVDIK
CCCCCCCCCEEEEEEC
>Mature Secondary Structure 
STDPTKPQIHTGKFKVHALALACSAILFPGTAFATSEVAPTAKESSKAAHGKELQSRFE
CCCCCCCCEECCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KGANIPGQQKSAEKNQRQHPIKGKAEKKIEGPMGASGPTAEAEDNMCSSELANLSGEALF
HCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
DAVRQAEISCISELYSRNDAVSVAAYQTENVVSVANQAAAIAATYDSSTGYEMRNLFYFL
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
RGAFYIEFYNDDLAYSDTQAADAVYAALVEYAKNPKLFEITPSAGDTLMEFFTSWASSDH
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCH
ILESVPVITDYLQMFNADFLASNRHRAAMTSALTTLYYGSWEEAYNSKAMEHGELIDALL
HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NIATADYIINSDYQYESTDAFHEFGRFYEYQKYWDLPQSLKTRLNDGVELYMSKFERMSA
HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHC
QWADGAGYLDYYNPGDCEQFGICGWEEELEQTALPINYSCSDTIYIRAQQLTNDELQSSC
CCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCHHHHHHH
DLMGGEETLFHDVLATGYQPVADDLNESLEVNIFDSYDDYAQYASVIFGINTNNGGMYLE
HCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHEEEEEEEEECCCCEEEE
GTPSQEGNHARFIAHEATWTDEILVWNLKHEYVHYLDGRFNLYGAFNYFDIDTGKSVWWT
CCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHCCEEEEEEEEEEEECCCCCCCHHH
EGLAEYISKQNRNDGAIELGRSQAYSLSEILSNTYDSGSDRVYSWGYLAVRFLFENHRSD
HHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCC
VDALLVLARGGDADGWLAYIDNTIGQNYNSEWNTWLASVSSNDDSISTGITPPVDSDGDG
CEEEEEEEECCCCCCEEEEEEHHHCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCC
VIDSQDAFPHDPSETHDTDGDGVGDNADAFPTDANETVDTDGDGVGDNGDVFPTDPTEWA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDGDGIGDNADTDGPVDPVDPVEPVEHCGAISITDGKLTQEQTECVAGSDINYFYTYVE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCHHHHHHHCCCCCEEEEEEEE
QDNTPLYITTSGGEGDVDLFFNQEIWAKPSAYTAKATAAGNDEQLNVIANRGWVYISLVA
CCCCEEEEEECCCCCCEEEEECCHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEEE
TAEYEGVSLSVSLTDGGDTGTPPVLVADACATQSPYSYGGVEFGEAVCIADGHSSYYFYV
EECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEE
PAGTEEISVASGHGSGDVNLYGNSQTWAGVDSYEVKSESSGNVESLTIATPVEGWYYISA
ECCCCEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEC
DGAPSSEGASLVVDIK
CCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1311172 [H]