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The map label for this gene is yajD [H]

Identifier: 167624741

GI number: 167624741

Start: 3433404

End: 3433778

Strand: Reverse

Name: yajD [H]

Synonym: Shal_2824

Alternate gene names: 167624741

Gene position: 3433778-3433404 (Counterclockwise)

Preceding gene: 167624742

Following gene: 167624739

Centisome position: 65.69

GC content: 43.73

Gene sequence:

>375_bases
ATGAGAAAGAGCATGTCGACCAATCAAGGGCAAAGTAAGTTAGATAGAGTATTAGCTGAGGCGAGAGAATATAAAGCCAA
GCGTGAAGTTGGTTATCGTGAACAGGCGCTTAAGCTTTACCCTTGGGTCTGTGGCCGCTGTACTCGCGAATTTAACAATG
CCAACCTAAGAGAGTTGACGGTCCACCATCGTGATCATAATCACGATAATAACCCATCTGATGGCTCTAACTGGGAGCTG
TTATGTCTCTATTGTCATGATAATGAGCACTCAAAGTTTGAAGAGTTGATCCAGTATGGCTCAACCACTGAGACTAAAGT
TGAAGCGGCGACTTATAATCCGTTTGCGGATTTAAAGAGCATGCTGAAGAAGTAG

Upstream 100 bases:

>100_bases
GTTCTGAATATTTAGGTAGCGAAGCTAACTAATCAAGGTAAACTTTGCGGTGAAATCTACCTAGACTCAATGGTACAATT
GAGTCTAGTAACAAACTTTA

Downstream 100 bases:

>100_bases
CACCGCAATTAACTTATACAAACATAATTGTAAAAAAGCCGCGAATAGCGGCTTTTTTGTTTTCAGCTCAAGCCGTTTTT
ATCAGGACGTGAACTCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRKSMSTNQGQSKLDRVLAEAREYKAKREVGYREQALKLYPWVCGRCTREFNNANLRELTVHHRDHNHDNNPSDGSNWEL
LCLYCHDNEHSKFEELIQYGSTTETKVEAATYNPFADLKSMLKK

Sequences:

>Translated_124_residues
MRKSMSTNQGQSKLDRVLAEAREYKAKREVGYREQALKLYPWVCGRCTREFNNANLRELTVHHRDHNHDNNPSDGSNWEL
LCLYCHDNEHSKFEELIQYGSTTETKVEAATYNPFADLKSMLKK
>Mature_124_residues
MRKSMSTNQGQSKLDRVLAEAREYKAKREVGYREQALKLYPWVCGRCTREFNNANLRELTVHHRDHNHDNNPSDGSNWEL
LCLYCHDNEHSKFEELIQYGSTTETKVEAATYNPFADLKSMLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=105, Percent_Identity=66.6666666666667, Blast_Score=152, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 14537; Mature: 14537

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSMSTNQGQSKLDRVLAEAREYKAKREVGYREQALKLYPWVCGRCTREFNNANLRELT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VHHRDHNHDNNPSDGSNWELLCLYCHDNEHSKFEELIQYGSTTETKVEAATYNPFADLKS
EECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHH
MLKK
HHCC
>Mature Secondary Structure
MRKSMSTNQGQSKLDRVLAEAREYKAKREVGYREQALKLYPWVCGRCTREFNNANLRELT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VHHRDHNHDNNPSDGSNWELLCLYCHDNEHSKFEELIQYGSTTETKVEAATYNPFADLKS
EECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHH
MLKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]