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The map label for this gene is nmpC [C]

Identifier: 167624646

GI number: 167624646

Start: 3308562

End: 3309776

Strand: Reverse

Name: nmpC [C]

Synonym: Shal_2728

Alternate gene names: 167624646

Gene position: 3309776-3308562 (Counterclockwise)

Preceding gene: 167624647

Following gene: 167624645

Centisome position: 63.32

GC content: 43.13

Gene sequence:

>1215_bases
ATGAAAAAGACTCTAGTAGCATCGGCCTTGGCGGCAGTGATATTCGTACCAACAGCATCAGCAATTGAAATTTATAAAGA
TGATAAGAACGCAGTAGAAATTGGTGGTTATGTTGATGCTCGTATCATCAACACTCAAGGTGCTACAGAAGTGGTTAACG
GCGCTTCACGTATTAATTTCGGTTTTACTCGCCAGATGAGTGATGGCTGGAAAGCCTATACTAAACTTGAGTGGGGCGTT
AACCCATTCGGTGACAGTAAGATTGTTTACAACAGTAACAGTACGTTCGAATCTAAAAGCGGTGACTTCCTTAACAATCG
TCTAGGTTATGTTGGTCTTGCTCACGATACTTACGGTTCAATCACTATCGGTAAGCAGTGGGGCGCGTGGTACGACGTAG
TTTACAACACTAACTATGGTTTCGTATGGGACGGTAACGCTTCAGGTACTTACACTTATAACAAGGCTGATGGTGCGATA
AACGGTACTGGTCGCGGTGACAAAACAGTTCAATACCGTAATGCGTTCGGTGATTTCAGCTTCGCAATTCAAGCTCAGCT
AAAGCAAGATACATTCGAAATAGGTGAAGTGCCAAGTGCTTCTAACCCACTTTTCCCTGCAGCTGATTTCATGTCAGTTA
AAGCTGCCGGTGTAAATGTTAATAGCTCAGTGACAACAGTTGAGTACAACTACACCTACGGTGGTGCGGCTACATACAAT
GTAACTGATATGCTAACTTTGACAGCTGGTTTCAACCTAGGTGAGTTTGAAGCAACAACGTCTGCAGGCAAGCGTCTAAC
AGAAACCGATTCTATCTATGGTGTTGGTGCAACATGGGGTAACTGGAATTCAGAAGGTGTTTACGCTGCATTTAACGTTA
ACAAGCAAGAGTTCCATGATACTGACAACCTAGGTCGTATGATGCCAGAAGCTAAGGGTCTTGAGTCTCTAGCATCTTAC
AAGTTCGAAAACGGTATCCGTACATTCGTTTCTTACAACATTTTAGATGCGGGTAGTGAATACGAAGCGGCTTACAACGG
TGATGTATTTAAGCGTCAATTCGTTGTAGCGGGTGTTCACTATGTTTGGGATTCAAACACAGTACTTTATCTAGAAGGTC
GTAAAGACTATAGCGACTTCACTGGTGTACATGCAGAAGCAATGGCAAAATCAGAAGATGACGGTATCGCAATCGGTATC
CGTTACACACTTTAA

Upstream 100 bases:

>100_bases
TTTTGCTAATCTCGCAGTTAATCAGGATAGAAAGAAAACAACGAAATGGATGTCAATTTGAATGAAGCAGACTGAACAAC
ATAAAGGTTAGGCAAATTAA

Downstream 100 bases:

>100_bases
TTTGTCTAATTAATAGTGATAGAAAAGCGCCTTTTAAGGCGCTTTTTTTTGGCTTGGATATTTTGAGATTAAAAGTGGAG
TATGAATATTGTTATGGCTG

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein N; Outer Membrane Pore Protein; Outer Membrane Protein; Tetrachloroethylene Dehalogenase

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINFGFTRQMSDGWKAYTKLEWGV
NPFGDSKIVYNSNSTFESKSGDFLNNRLGYVGLAHDTYGSITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAI
NGTGRGDKTVQYRNAFGDFSFAIQAQLKQDTFEIGEVPSASNPLFPAADFMSVKAAGVNVNSSVTTVEYNYTYGGAATYN
VTDMLTLTAGFNLGEFEATTSAGKRLTETDSIYGVGATWGNWNSEGVYAAFNVNKQEFHDTDNLGRMMPEAKGLESLASY
KFENGIRTFVSYNILDAGSEYEAAYNGDVFKRQFVVAGVHYVWDSNTVLYLEGRKDYSDFTGVHAEAMAKSEDDGIAIGI
RYTL

Sequences:

>Translated_404_residues
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINFGFTRQMSDGWKAYTKLEWGV
NPFGDSKIVYNSNSTFESKSGDFLNNRLGYVGLAHDTYGSITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAI
NGTGRGDKTVQYRNAFGDFSFAIQAQLKQDTFEIGEVPSASNPLFPAADFMSVKAAGVNVNSSVTTVEYNYTYGGAATYN
VTDMLTLTAGFNLGEFEATTSAGKRLTETDSIYGVGATWGNWNSEGVYAAFNVNKQEFHDTDNLGRMMPEAKGLESLASY
KFENGIRTFVSYNILDAGSEYEAAYNGDVFKRQFVVAGVHYVWDSNTVLYLEGRKDYSDFTGVHAEAMAKSEDDGIAIGI
RYTL
>Mature_404_residues
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINFGFTRQMSDGWKAYTKLEWGV
NPFGDSKIVYNSNSTFESKSGDFLNNRLGYVGLAHDTYGSITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAI
NGTGRGDKTVQYRNAFGDFSFAIQAQLKQDTFEIGEVPSASNPLFPAADFMSVKAAGVNVNSSVTTVEYNYTYGGAATYN
VTDMLTLTAGFNLGEFEATTSAGKRLTETDSIYGVGATWGNWNSEGVYAAFNVNKQEFHDTDNLGRMMPEAKGLESLASY
KFENGIRTFVSYNILDAGSEYEAAYNGDVFKRQFVVAGVHYVWDSNTVLYLEGRKDYSDFTGVHAEAMAKSEDDGIAIGI
RYTL

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44138; Mature: 44138

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINF
CCCHHHHHHHEEEEEECCCCEEEEEECCCCEEEECCEEEEEEEECCCCHHHHCCCHHCCC
GFTRQMSDGWKAYTKLEWGVNPFGDSKIVYNSNSTFESKSGDFLNNRLGYVGLAHDTYGS
CEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCC
ITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAINGTGRGDKTVQYRNAFGDFS
EEECCCCCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEE
FAIQAQLKQDTFEIGEVPSASNPLFPAADFMSVKAAGVNVNSSVTTVEYNYTYGGAATYN
EEEEEEECCCCHHHCCCCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEEEEEECCEEEEE
VTDMLTLTAGFNLGEFEATTSAGKRLTETDSIYGVGATWGNWNSEGVYAAFNVNKQEFHD
HEEEEEEEECCCCCCEECHHHCCCEEECCCCEEEECCCCCCCCCCCEEEEEECCHHHHCC
TDNLGRMMPEAKGLESLASYKFENGIRTFVSYNILDAGSEYEAAYNGDVFKRQFVVAGVH
CHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEEEEEE
YVWDSNTVLYLEGRKDYSDFTGVHAEAMAKSEDDGIAIGIRYTL
EEECCCEEEEEECCCCCCHHCCCCHHHHCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINF
CCCHHHHHHHEEEEEECCCCEEEEEECCCCEEEECCEEEEEEEECCCCHHHHCCCHHCCC
GFTRQMSDGWKAYTKLEWGVNPFGDSKIVYNSNSTFESKSGDFLNNRLGYVGLAHDTYGS
CEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCC
ITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAINGTGRGDKTVQYRNAFGDFS
EEECCCCCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEE
FAIQAQLKQDTFEIGEVPSASNPLFPAADFMSVKAAGVNVNSSVTTVEYNYTYGGAATYN
EEEEEEECCCCHHHCCCCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEEEEEECCEEEEE
VTDMLTLTAGFNLGEFEATTSAGKRLTETDSIYGVGATWGNWNSEGVYAAFNVNKQEFHD
HEEEEEEEECCCCCCEECHHHCCCEEECCCCEEEECCCCCCCCCCCEEEEEECCHHHHCC
TDNLGRMMPEAKGLESLASYKFENGIRTFVSYNILDAGSEYEAAYNGDVFKRQFVVAGVH
CHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEEEEEE
YVWDSNTVLYLEGRKDYSDFTGVHAEAMAKSEDDGIAIGIRYTL
EEECCCEEEEEECCCCCCHHCCCCHHHHCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA